RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 VPS11Q9H270 941 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 ZNF395Q9H8N7 513 aaPredicted RBP12.46□□□□□ -0.41
CPNE8-203ENST00000538596 PLAC1Q9HBJ0 212 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 NR2E3Q9Y5X4 410 aa12.46□□□□□ -0.41
CPNE8-203ENST00000538596 PRPSAP2O60256 369 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 SKAP2O75563 359 aaPredicted RBP12.46□□□□□ -0.42
CPNE8-203ENST00000538596 IL18RAPO95256 599 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 TFE3P19532 575 aaPredicted RBP12.46□□□□□ -0.42
CPNE8-203ENST00000538596 YWHAZP63104 245 aaKnown RBP12.46□□□□□ -0.42
CPNE8-203ENST00000538596 BMPR2Q13873 1038 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 KRT81Q14533 505 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 CCDC14Q49A88 953 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 ILDR2Q71H61 639 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 BZW1Q7L1Q6 419 aaKnown RBP12.46□□□□□ -0.42
CPNE8-203ENST00000538596 PQLC3Q8N755 202 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 CCDC110Q8TBZ0 833 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 RNF157Q96PX1 679 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 NUDCD1Q96RS6 583 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 CNPY3Q9BT09 278 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 PDZD7Q9H5P4 517 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 ELP3Q9H9T3 547 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 RNPEPL1Q9HAU8 725 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 GPRC5DQ9NZD1 345 aa12.46□□□□□ -0.42
CPNE8-203ENST00000538596 IQANK1A0A1B0GTG1 560 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 TRIM49D1C9J1S8 452 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 F5H423 210 aaPredicted RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 ENDOD1O94919 500 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 C1QAP02745 245 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 APRTP07741 180 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 TXNP10599 105 aaKnown RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 PPP6R3Q5H9R7 873 aaPredicted RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 MOB2Q70IA6 237 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 SCUBE3Q8IX30 993 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 APOPT1Q96IL0 206 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 CLMNQ96JQ2 1002 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 FAM167BQ9BTA0 163 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 TMEM120AQ9BXJ8 343 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 B3GNT5Q9BYG0 378 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 TRIM55Q9BYV6 548 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 PHACTR1Q9C0D0 580 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 SMYD2Q9NRG4 433 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 FAM49BQ9NUQ9 324 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 A0A0G2JMZ2 1700 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 LRRC37A2A6NM11 1700 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 FAM237BA0A1B0GVD1 139 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 GAS2O43903 313 aaKnown RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 C22orf31O95567 290 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 DHRS4L1P0CG22 281 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 VDRP11473 427 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 ARF4P18085 180 aaPredicted RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 GNAZP19086 355 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 PTPN4P29074 926 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 STIP1P31948 543 aaKnown RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 PCK1P35558 622 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 ARFIP2P53365 341 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 ATXN1P54253 815 aaKnown RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 AMHR2Q16671 573 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 CES4AQ5XG92 561 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 PMF1Q6P1K2 205 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 CAND1Q86VP6 1230 aaKnown RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 PCDH19Q8TAB3 1148 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 CADM1Q9BY67 442 aaKnown RBP12.45□□□□□ -0.42
CPNE8-203ENST00000538596 SLC13A1Q9BZW2 595 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 ARMCX1Q9P291 453 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 TTLL3Q9Y4R7 772 aa12.45□□□□□ -0.42
CPNE8-203ENST00000538596 CCDC195A0A1B0GUA6 201 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 ADM5C9JUS6 153 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 CYB561D2O14569 222 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 HCRTO43612 131 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 WFS1O76024 890 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 TOP3BO95985 862 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 TPBGLP0DKB5 382 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 INSRRP14616 1297 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 CALB2P22676 271 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 PRKD1Q15139 912 aaPredicted RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 PPP1R26Q5T8A7 1209 aaPredicted RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 TRIM68Q6AZZ1 485 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 CCDC62Q6P9F0 684 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 DSTYKQ6XUX3 929 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 FAM172AQ8WUF8 416 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 ALKBH8Q96BT7 664 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 SRPK1Q96SB4 655 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 AKT3Q9Y243 479 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 PPEF2O14830 753 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 DLDP09622 509 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 SERPINB4P48594 390 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 SLC18A2Q05940 514 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 TMEM132DQ14C87 1099 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 GOLGA7BQ2TAP0 167 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 NETO2Q8NC67 525 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 STK32AQ8WU08 396 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 MIS12Q9H081 205 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 SMARCAD1Q9H4L7 1026 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 ZC3H7BQ9UGR2 993 aaKnown RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 BARX2Q9UMQ3 279 aaPredicted RBP12.44□□□□□ -0.42
CPNE8-203ENST00000538596 SUFUQ9UMX1 484 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 SCN1AP35498 2009 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 GABBR2O75899 941 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 HAUS5O94927 633 aa12.44□□□□□ -0.42
CPNE8-203ENST00000538596 UPP2O95045 317 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms