RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 H0Y626 953 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 TRIM24O15164 1050 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 TRIM16O95361 564 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 RDXP35241 583 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 TNNC1P63316 161 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 CEBPZQ03701 1054 aaKnown RBP14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 SURF1Q15526 300 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 C8orf34Q49A92 452 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 MIB1Q86YT6 1006 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 TERB1Q8NA31 727 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 RDH13Q8NBN7 331 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 SPRYD3Q8NCJ5 442 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 B3GALNT2Q8NCR0 500 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 HSPA12BQ96MM6 686 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 CAMK1GQ96NX5 476 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 B3GNT5Q9BYG0 378 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 CCSER2Q9H7U1 834 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 CHORDC1Q9UHD1 332 aaPredicted RBP14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 CYP8B1Q9UNU6 501 aa14.88□□□□□ -0.03
SMARCA4-206ENST00000538456 A0A087X0B3 334 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 IGHV1OR15-9A0A0B4J2B8 117 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 A8MXQ7 604 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 TAF4O00268 1085 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 ARHGAP33O14559 1287 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 KIAA0391O15091 583 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 HOXC11O43248 304 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 TACC1O75410 805 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 CLSTN1O94985 981 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 CST3P01034 146 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 CD59P13987 128 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 TNNI1P19237 187 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 WDR72Q3MJ13 1102 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 HECTD3Q5T447 861 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 EGFLAMQ63HQ2 1017 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 CCDC73Q6ZRK6 1079 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 RABEPKQ7Z6M1 372 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 PROSER1Q86XN7 944 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 TMEM25Q86YD3 366 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 SLC41A1Q8IVJ1 513 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 NUP93Q8N1F7 819 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 TRIML1Q8N9V2 468 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 PDZD8Q8NEN9 1154 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 SCAMP5Q8TAC9 235 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 WBP2Q969T9 261 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 OTUB2Q96DC9 234 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 KCNK16Q96T55 309 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 ACOX2Q99424 681 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 NACA2Q9H009 215 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 SPHK2Q9NRA0 654 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 NXF1Q9UBU9 619 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 HCN2Q9UL51 889 aa14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 SRPRBQ9Y5M8 271 aaKnown RBP14.87□□□□□ -0.03
SMARCA4-206ENST00000538456 A0A1W2PQF6 199 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 ZBTB24O43167 697 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 SH3BP5O60239 455 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 RTN3O95197 1032 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 NDUFV2P19404 249 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 NTSR1P30989 418 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 SNRNP35Q16560 246 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 ZNF423Q2M1K9 1284 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 PLEKHG6Q3KR16 790 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 PREPLQ4J6C6 727 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 FAM173BQ6P4H8 233 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 C19orf48Q6RUI8 117 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 NUDT18Q6ZVK8 323 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 STXBP4Q6ZWJ1 553 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 RAB44Q7Z6P3 723 aaPredicted RBP14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 CCDC65Q8IXS2 484 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 CHPFQ8IZ52 775 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 RGL4Q8IZJ4 473 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 PDILTQ8N807 584 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 KCNV2Q8TDN2 545 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 CCDC127Q96BQ5 260 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 MED10Q9BTT4 135 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 SLC6A17Q9H1V8 727 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 CD93Q9NPY3 652 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 DNAJC17Q9NVM6 304 aaKnown RBP14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 GMIPQ9P107 970 aa14.86□□□□□ -0.03
SMARCA4-206ENST00000538456 ACACAQ13085 2346 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 NEDD8-MDP1E9PL57 170 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 SYPP08247 313 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 HOXD13P35453 343 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 CYP2J2P51589 502 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 SLC5A3P53794 718 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 MYL6P60660 151 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 SCAPQ12770 1279 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 TRIP6Q15654 476 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 GRAMD4Q6IC98 578 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 FAM35AQ86V20 835 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 OVCA2Q8WZ82 227 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 CGRRF1Q99675 332 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 KIAA1586Q9HCI6 787 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 DNAAF2Q9NVR5 837 aaKnown RBP14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 PCDHB9Q9Y5E1 797 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 RAD54BQ9Y620 910 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 ATP8B3O60423 1300 aa14.85□□□□□ -0.03
SMARCA4-206ENST00000538456 SMG1Q96Q15 3661 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms