RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 PHBP35232 272 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 MRPS22P82650 360 aaKnown RBP11.09□□□□□ -0.63
RTN3-208ENST00000537981 KCNC4Q03721 635 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 USP41Q3LFD5 358 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 DNAL1Q4LDG9 190 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 TIGD2Q4W5G0 525 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 FRMD5Q7Z6J6 570 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 KBTBD6Q86V97 674 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 CADM3Q8N126 398 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 ZNF564Q8TBZ8 553 aaPredicted RBP11.09□□□□□ -0.63
RTN3-208ENST00000537981 CFAP57Q96MR6 1250 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 NYXQ9GZU5 481 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 C10orf88Q9H8K7 445 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 C17orf75Q9HAS0 396 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 SH3GLB2Q9NR46 395 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 PIK3R2O00459 728 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 MEIS1O00470 390 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 CCNT2O60583 730 aaKnown RBP11.09□□□□□ -0.63
RTN3-208ENST00000537981 FBXO21O94952 628 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 NR3C1P04150 777 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 INHBBP09529 407 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 RALAP11233 206 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 CPA3P15088 417 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 EPHA3P29320 983 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 HSD17B4P51659 736 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 BMXP51813 675 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 GPC5P78333 572 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 IFITM2Q01629 132 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 VAC14Q08AM6 782 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 BST1Q10588 318 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 NR1D2Q14995 579 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 CARTPTQ16568 116 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 KRT79Q5XKE5 535 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 TDRPQ86YL5 185 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 RHOT2Q8IXI1 618 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 DEFB107AQ8IZN7 70 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 ZCCHC9Q8N567 271 aaKnown RBP11.09□□□□□ -0.63
RTN3-208ENST00000537981 SLC15A4Q8N697 577 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 DAGLBQ8NCG7 672 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 DYNLL2Q96FJ2 89 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 RILPQ96NA2 401 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 GPR101Q96P66 508 aaPredicted RBP11.09□□□□□ -0.63
RTN3-208ENST00000537981 WRNIP1Q96S55 665 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 PAFAH2Q99487 392 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 KLC2Q9H0B6 622 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 RETREG1Q9H6L5 497 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 CAAP1Q9H8G2 361 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 MRGBPQ9NV56 204 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 HERC5Q9UII4 1024 aaKnown RBP11.09□□□□□ -0.63
RTN3-208ENST00000537981 MOSPD1Q9UJG1 213 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 MAFBQ9Y5Q3 323 aaPredicted RBP11.09□□□□□ -0.63
RTN3-208ENST00000537981 USP54Q70EL1 1684 aa11.09□□□□□ -0.63
RTN3-208ENST00000537981 COL18A1P39060 1754 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 DENND3A2RUS2 1198 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 F5H6K3 240 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 LPXNO60711 386 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 FAM155BO75949 473 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 SGPL1O95470 568 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 ABHD2P08910 425 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 PLA2G4BP0C869 781 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 ZNF23P17027 643 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 KLRC2P26717 231 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 GJC1P36383 396 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 PPARGP37231 505 aaPredicted RBP11.08□□□□□ -0.64
RTN3-208ENST00000537981 ALDH3B2P48448 385 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 PUM3Q15397 648 aaKnown RBP11.08□□□□□ -0.64
RTN3-208ENST00000537981 FAAH2Q6GMR7 532 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 NIPAL1Q6NVV3 410 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 PGM2L1Q6PCE3 622 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 PEX5LQ8IYB4 626 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 PQLC1Q8N2U9 271 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 RNF148Q8N7C7 305 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 SLC43A3Q8NBI5 491 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 CHPT1Q8WUD6 406 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 TAMM41Q96BW9 452 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.08□□□□□ -0.64
RTN3-208ENST00000537981 VPS11Q9H270 941 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 AVENQ9NQS1 362 aaPredicted RBP11.08□□□□□ -0.64
RTN3-208ENST00000537981 TYW1Q9NV66 732 aaKnown RBP11.08□□□□□ -0.64
RTN3-208ENST00000537981 PLK2Q9NYY3 685 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 RABGEF1Q9UJ41 708 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 MEGF6O75095 1541 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 C7orf72A4D263 438 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 NOTOA8MTQ0 251 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 FDX1P10109 184 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 MLLT10P55197 1068 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 XIAPP98170 497 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 ITGADQ13349 1161 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 FAM91A1Q658Y4 838 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 POTEGQ6S5H5 508 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 TPTE2Q6XPS3 522 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 ATG14Q6ZNE5 492 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 RFPL4BQ6ZWI9 263 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 GPR180Q86V85 440 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 BPHLQ86WA6 291 aaPredicted RBP11.08□□□□□ -0.64
RTN3-208ENST00000537981 ARHGEF19Q8IW93 802 aa11.08□□□□□ -0.64
RTN3-208ENST00000537981 HAS1Q92839 578 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms