RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 CAPN2P17655 700 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 IL4RP24394 825 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 GPS1Q13098 491 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 TFDP2Q14188 446 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 MBTPS1Q14703 1052 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 CA9Q16790 459 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 ZC3H12AQ5D1E8 599 aaKnown RBP23.7■■□□□ 1.38
HMGA2-206ENST00000536545 EFHC1Q5JVL4 640 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 CD300LGQ6UXG3 332 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 RELL1Q8IUW5 271 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 MAP7D3Q8IWC1 876 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 ZCCHC9Q8N567 271 aaKnown RBP23.7■■□□□ 1.38
HMGA2-206ENST00000536545 SPATA18Q8TC71 538 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 FAF2Q96CS3 445 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 RNF157Q96PX1 679 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 MED10Q9BTT4 135 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.7■■□□□ 1.38
HMGA2-206ENST00000536545 CDH9Q9ULB4 789 aa23.7■■□□□ 1.38
HMGA2-206ENST00000536545 ODC1P11926 461 aa23.69■■□□□ 1.38
HMGA2-206ENST00000536545 APLP1P51693 650 aa23.69■■□□□ 1.38
HMGA2-206ENST00000536545 TUSC3Q13454 348 aa23.69■■□□□ 1.38
HMGA2-206ENST00000536545 NOMO1Q15155 1222 aa23.69■■□□□ 1.38
HMGA2-206ENST00000536545 DNAJC21Q5F1R6 531 aaKnown RBP23.69■■□□□ 1.38
HMGA2-206ENST00000536545 SLAIN1Q8ND83 568 aa23.69■■□□□ 1.38
HMGA2-206ENST00000536545 RTP3Q9BQQ7 232 aa23.69■■□□□ 1.38
HMGA2-206ENST00000536545 MCF2LO15068 1137 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 CYP11A1P05108 521 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 MATKP42679 507 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 GDF10P55107 478 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 EIF3EP60228 445 aaKnown RBP23.68■■□□□ 1.38
HMGA2-206ENST00000536545 RNASEH2BQ5TBB1 312 aaKnown RBP23.68■■□□□ 1.38
HMGA2-206ENST00000536545 STRADAQ7RTN6 431 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 TLCD1Q96CP7 247 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 PCED1BQ96HM7 432 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 PWWP2AQ96N64 755 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 ZNF670Q9BS34 389 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 PTCH2Q9Y6C5 1203 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 MYBPHLA2RUH7 354 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 IBSPP21815 317 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-206ENST00000536545 MAP2K2P36507 400 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 MRPS5P82675 430 aaKnown RBP23.68■■□□□ 1.38
HMGA2-206ENST00000536545 MORF4L2Q15014 288 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 DPYSL2Q16555 572 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 OTUD1Q5VV17 481 aaPredicted RBP23.68■■□□□ 1.38
HMGA2-206ENST00000536545 PQLC3Q8N755 202 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 MYCBPAPQ8TBZ2 947 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 UROC1Q96N76 676 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 MAK16Q9BXY0 300 aaKnown RBP23.68■■□□□ 1.38
HMGA2-206ENST00000536545 C10orf88Q9H8K7 445 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 RGS18Q9NS28 235 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 DNAJC17Q9NVM6 304 aaKnown RBP23.68■■□□□ 1.38
HMGA2-206ENST00000536545 TPX2Q9ULW0 747 aaKnown RBP23.68■■□□□ 1.38
HMGA2-206ENST00000536545 INPP5FQ9Y2H2 1132 aa23.68■■□□□ 1.38
HMGA2-206ENST00000536545 NDC80O14777 642 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 IFNB1P01574 187 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 PAX3P23760 479 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 PCSK1P29120 753 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 ATXN1P54253 815 aaKnown RBP23.67■■□□□ 1.38
HMGA2-206ENST00000536545 MAP3K7CLP57077 242 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 ANKRD20A8PQ5CZ79 823 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 SLC9A4Q6AI14 798 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 NPNTQ6UXI9 565 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 LINC01599Q8WXQ3 324 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 NDRG1Q92597 394 aaKnown RBP23.67■■□□□ 1.38
HMGA2-206ENST00000536545 SMOQ99835 787 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 LRRC4Q9HBW1 653 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 HMX1Q9NP08 348 aaPredicted RBP23.67■■□□□ 1.38
HMGA2-206ENST00000536545 NINJ2Q9NZG7 142 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 CALCOCO1Q9P1Z2 691 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 SHOC2Q9UQ13 582 aa23.67■■□□□ 1.38
HMGA2-206ENST00000536545 I3L4J1 428 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 M0QZQ0 153 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 AP1G2O75843 785 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 B3GAT3O94766 335 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 TTC4O95801 387 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 SLC25A52Q3SY17 297 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 ERMARDQ5T6L9 678 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 CEP128Q6ZU80 1094 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 BNIPLQ7Z465 357 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 CROCCP2Q86T23 111 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 DEFB106AQ8N104 65 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 PLD5Q8N7P1 536 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 ZMIZ2Q8NF64 920 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 PCDH19Q8TAB3 1148 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 PGM2Q96G03 612 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 SLC2A13Q96QE2 648 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 CAPS2Q9BXY5 557 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 STARD7Q9NQZ5 370 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 TMEM30AQ9NV96 361 aa23.66■■□□□ 1.38
HMGA2-206ENST00000536545 FARP1Q9Y4F1 1045 aaPredicted RBP23.66■■□□□ 1.38
HMGA2-206ENST00000536545 C9IYK1 514 aa23.65■■□□□ 1.38
HMGA2-206ENST00000536545 RBP3P10745 1247 aa23.65■■□□□ 1.38
HMGA2-206ENST00000536545 TGM2P21980 687 aa23.65■■□□□ 1.38
HMGA2-206ENST00000536545 NDUFV1P49821 464 aa23.65■■□□□ 1.38
HMGA2-206ENST00000536545 PAN2Q504Q3 1202 aaKnown RBP23.65■■□□□ 1.38
HMGA2-206ENST00000536545 RTN4RL1Q86UN2 441 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-206ENST00000536545 SIX6OS1Q8N1H7 587 aa23.65■■□□□ 1.38
HMGA2-206ENST00000536545 UHMK1Q8TAS1 419 aaKnown RBP23.65■■□□□ 1.38
HMGA2-206ENST00000536545 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.65■■□□□ 1.38
HMGA2-206ENST00000536545 NT5C3BQ969T7 300 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms