RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 KCNK16Q96T55 309 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 P2RY13Q9BPV8 354 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 IMPG2Q9BZV3 1241 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 APOBEC3GQ9HC16 384 aaKnown RBP11.44□□□□□ -0.58
CCDC60-202ENST00000535685 PNPLA8Q9NP80 782 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 SMG5Q9UPR3 1016 aaKnown RBP11.44□□□□□ -0.58
CCDC60-202ENST00000535685 MAPK8IP1Q9UQF2 711 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 PI4KAP42356 2102 aa11.44□□□□□ -0.58
CCDC60-202ENST00000535685 E2F8A0AVK6 867 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 TK2O00142 265 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 CETN3O15182 167 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 STX10O60499 249 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 LRP3O75074 770 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 CILPO75339 1184 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 PRCPP42785 496 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 GCLMP48507 274 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 SLC5A3P53794 718 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 PNOCQ13519 176 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 GAB4Q2WGN9 574 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 LAIR1Q6GTX8 287 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 SPOPLQ6IQ16 392 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 FOXR2Q6PJQ5 311 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 SCARA5Q6ZMJ2 495 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 ADGRG2Q8IZP9 1017 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 ZNF276Q8N554 614 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 CAMKK1Q8N5S9 505 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 SCAMP5Q8TAC9 235 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 TAS1R2Q8TE23 839 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 CD101Q93033 1021 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 FBXO32Q969P5 355 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 OTUB2Q96DC9 234 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 SMOQ99835 787 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 NT5C1AQ9BXI3 368 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 DNAI2Q9GZS0 605 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 NIF3L1Q9GZT8 377 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 LINC00597Q9H2U6 94 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 FBXO44Q9H4M3 255 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 FBRSL1Q9HCM7 1045 aaKnown RBP11.43□□□□□ -0.58
CCDC60-202ENST00000535685 PRM3Q9NNZ6 103 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 TBC1D14Q9P2M4 693 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 COQ4Q9Y3A0 265 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 CPQQ9Y646 472 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 WNT6Q9Y6F9 365 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 NUP205Q92621 2012 aa11.43□□□□□ -0.58
CCDC60-202ENST00000535685 A0A0A0MRY4 1105 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 GOLGA6L4A6NEF3 574 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 BHMG1C9JSJ3 638 aaPredicted RBP11.42□□□□□ -0.58
CCDC60-202ENST00000535685 SLC16A3O15427 465 aaKnown RBP11.42□□□□□ -0.58
CCDC60-202ENST00000535685 HRO43593 1189 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 SMC2O95347 1197 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 EGFP01133 1207 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 TRIM49P0CI25 452 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 TRIM49CP0CI26 452 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 EPB41P11171 864 aaKnown RBP11.42□□□□□ -0.58
CCDC60-202ENST00000535685 TGM1P22735 817 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 EIF2DP41214 584 aaKnown RBP11.42□□□□□ -0.58
CCDC60-202ENST00000535685 FKBP3Q00688 224 aaKnown RBP11.42□□□□□ -0.58
CCDC60-202ENST00000535685 LRRC63Q05C16 580 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 HECTD3Q5T447 861 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 ERMP1Q7Z2K6 904 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 CCDC150Q8NCX0 1101 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 SLC2A14Q8TDB8 520 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 WHAMMQ8TF30 809 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 ZFRQ96KR1 1074 aaKnown RBP11.42□□□□□ -0.58
CCDC60-202ENST00000535685 MED10Q9BTT4 135 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 KRT82Q9NSB4 513 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 C2orf42Q9NWW7 574 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 NCDNQ9UBB6 729 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 HMGXB4Q9UGU5 601 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 HOOK1Q9UJC3 728 aaKnown RBP11.42□□□□□ -0.58
CCDC60-202ENST00000535685 SCML2Q9UQR0 700 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 PCDHA5Q9Y5H7 936 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 PLXND1Q9Y4D7 1925 aa11.42□□□□□ -0.58
CCDC60-202ENST00000535685 TPRP12270 2363 aaKnown RBP11.41□□□□□ -0.58
CCDC60-202ENST00000535685 HHLA1C9JL84 531 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 PMM2O15305 246 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 COCHO43405 550 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 BEST1O76090 585 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 RETP07949 1114 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 FAM200BP0CF97 657 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 MBL2P11226 248 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-202ENST00000535685 CCDC130P13994 396 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 OPRD1P41143 372 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 PPP1R2P41236 205 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 ID4P47928 161 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 FNTBP49356 437 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 MXI1P50539 228 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 DHCR24Q15392 516 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 PKN3Q6P5Z2 889 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 KLHDC10Q6PID8 442 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 CLEC20AQ6ZU45 233 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 SYT13Q7L8C5 426 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 FILIP1Q7Z7B0 1213 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 SMYD4Q8IYR2 804 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-202ENST00000535685 DCLK2Q8N568 766 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 C12orf29Q8N999 325 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 FBXL13Q8NEE6 735 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 EZH1Q92800 747 aaPredicted RBP11.41□□□□□ -0.58
CCDC60-202ENST00000535685 ACDQ96AP0 544 aa11.41□□□□□ -0.58
CCDC60-202ENST00000535685 ELMO3Q96BJ8 720 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms