RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 ZNF341Q9BYN7 854 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 RSPH9Q9H1X1 276 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-210ENST00000534172 XPNPEP3Q9NQH7 507 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 ASAP1Q9ULH1 1129 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 UNC13BO14795 1591 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 JCADQ9P266 1359 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 AGLP35573 1532 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 LRRC9Q6ZRR7 1453 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 MYO3AQ8NEV4 1616 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 PIPSLA2A3N6 862 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 SYT5O00445 386 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 SERPINF1P36955 418 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 NPTX2P47972 431 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 GCLCP48506 637 aaPredicted RBP4.03□□□□□ -1.76
CSMD3-210ENST00000534172 SLC11A2P49281 568 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 SLC25A3Q00325 362 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 FAM180BQ6P0A1 224 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 BEND5Q7L4P6 421 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 GALNT15Q8N3T1 639 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 TTC30BQ8N4P2 665 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 Q8NA96 180 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 COQ10AQ96MF6 247 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 PPP1R9BQ96SB3 815 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 PRRX2Q99811 253 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 ZSWIM1Q9BR11 485 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 SMURF2Q9HAU4 748 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 SMC4Q9NTJ3 1288 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 GGA3Q9NZ52 723 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 REXO2Q9Y3B8 237 aaKnown RBP4.03□□□□□ -1.76
CSMD3-210ENST00000534172 NINLQ9Y2I6 1382 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 STRCP1A6NGW2 1772 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 DEPDC5O75140 1603 aa4.03□□□□□ -1.76
CSMD3-210ENST00000534172 SPATA31A6Q5VVP1 1343 aa4.03□□□□□ -1.77
CSMD3-210ENST00000534172 TMEM191CA6NGB0 347 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 AQP12BA6NM10 295 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 IRAK2O43187 625 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 SUN1O94901 812 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 KIF20AO95235 890 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ANXA2P07355 339 aaKnown RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ADH4P08319 380 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 NDUFV1P49821 464 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 PTTG1IPP53801 180 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 EIF5P55010 431 aaKnown RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 MPP1Q00013 466 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ITIH3Q06033 890 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ABHD18Q0P651 414 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 E2F2Q14209 437 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 SPARCL1Q14515 664 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 TAF3Q5VWG9 929 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ZKSCAN2Q63HK3 967 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 GET4Q7L5D6 327 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 PROKR1Q8TCW9 393 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 SPSB4Q96A44 273 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 PGBD1Q96JS3 809 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ZNF830Q96NB3 372 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 SEC62Q99442 399 aaKnown RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 PTDSS2Q9BVG9 487 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ZNF768Q9H5H4 540 aaKnown RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 TMEM51Q9NW97 253 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 IFT80Q9P2H3 777 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 TESQ9UGI8 421 aaKnown RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 LRP6O75581 1613 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 PHLPP1O60346 1717 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 SPHKAPQ2M3C7 1700 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ARID1BQ8NFD5 2236 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 RTEL1-TNFRSF6BF6WH68 1400 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 A0A0B4J269 797 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 F5H697 171 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 PYCARD-AS1I3L0S3 204 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 IPO5O00410 1097 aaKnown RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 HNRNPDLO14979 420 aaKnown RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 MT-ND5P03915 603 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 VDRP11473 427 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 CD6P30203 668 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 UCP3P55916 312 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 CTBP1Q13363 440 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 TUBB3Q13509 450 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 NBPF8Q3BBV2 869 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 KRTAP5-3Q6L8H2 238 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 TMPRSS9Q7Z410 1059 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 LCORLQ8N3X6 602 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 LNX2Q8N448 690 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 PCSK9Q8NBP7 692 aaKnown RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ZNF668Q96K58 619 aaPredicted RBP4.02□□□□□ -1.77
CSMD3-210ENST00000534172 SLC46A1Q96NT5 459 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 SLC26A6Q9BXS9 759 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 FAM83DQ9H4H8 585 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 HS3ST4Q9Y661 456 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 ROBO1Q9Y6N7 1651 aa4.02□□□□□ -1.77
CSMD3-210ENST00000534172 PODXLO00592 558 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 FIBPO43427 364 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CD4P01730 458 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 POLBP06746 335 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 ELANEP08246 267 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CKMT1AP12532 417 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 MYL4P12829 197 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 IDEP14735 1019 aa4.01□□□□□ -1.77
CSMD3-210ENST00000534172 CNTFP26441 200 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms