RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 P2RY13Q9BPV8 354 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 KLF16Q9BXK1 252 aaPredicted RBP10.18□□□□□ -0.78
SSBP3-215ENST00000533946 SMOC1Q9H4F8 434 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 THG1LQ9NWX6 298 aaKnown RBP10.18□□□□□ -0.78
SSBP3-215ENST00000533946 ZSCAN32Q9NX65 697 aa10.18□□□□□ -0.78
SSBP3-215ENST00000533946 TLR5O60602 858 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 KINO60870 393 aaKnown RBP10.17□□□□□ -0.78
SSBP3-215ENST00000533946 SMC2O95347 1197 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 HMBSP08397 361 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 FMO5P49326 533 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 KIF11P52732 1056 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 FKBP3Q00688 224 aaKnown RBP10.17□□□□□ -0.78
SSBP3-215ENST00000533946 PDE4CQ08493 712 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 CUL2Q13617 745 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 PDGFRLQ15198 375 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 GOLGA7BQ2TAP0 167 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 ZNF528Q3MIS6 628 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 C2orf27AQ580R0 203 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 HSP90AA4PQ58FG1 418 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 HECTD3Q5T447 861 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 SNX30Q5VWJ9 437 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 TMEM92Q6UXU6 159 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 TOGARAM2Q6ZUX3 1019 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 PIGZQ86VD9 579 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 CLEC4CQ8WTT0 213 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 RMDN1Q96DB5 314 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 TMEM176AQ96HP8 235 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 SLITRK1Q96PX8 696 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 SRRTQ9BXP5 876 aaKnown RBP10.17□□□□□ -0.78
SSBP3-215ENST00000533946 DUSP16Q9BY84 665 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 KIF9Q9HAQ2 790 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 CYP3A43Q9HB55 503 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 RXFP3Q9NSD7 469 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 RMND1Q9NWS8 449 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 PLK2Q9NYY3 685 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 ARMCX3Q9UH62 379 aaPredicted RBP10.17□□□□□ -0.78
SSBP3-215ENST00000533946 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 SMG5Q9UPR3 1016 aaKnown RBP10.17□□□□□ -0.78
SSBP3-215ENST00000533946 CACNA1AO00555 2505 aa10.17□□□□□ -0.78
SSBP3-215ENST00000533946 RALGAPA1Q6GYQ0 2036 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 NCAM2O15394 837 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 SLC16A3O15427 465 aaKnown RBP10.16□□□□□ -0.78
SSBP3-215ENST00000533946 RTN3O95197 1032 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-215ENST00000533946 RARGP13631 454 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 TCF3P15923 654 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 BRD2P25440 801 aaKnown RBP10.16□□□□□ -0.78
SSBP3-215ENST00000533946 GTF2H1P32780 548 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 RGS7P49802 495 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 MAMSTRQ6ZN01 415 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 KBTBD6Q86V97 674 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 TRIM59Q8IWR1 403 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 CPA6Q8N4T0 437 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 ATRIPQ8WXE1 791 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 CD101Q93033 1021 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 DHTKD1Q96HY7 919 aaPredicted RBP10.16□□□□□ -0.78
SSBP3-215ENST00000533946 ACOX2Q99424 681 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 CRACR2AQ9BSW2 395 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 IRF2BPLQ9H1B7 796 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.16□□□□□ -0.78
SSBP3-215ENST00000533946 TJP2Q9UDY2 1190 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 SCML2Q9UQR0 700 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 USP3Q9Y6I4 520 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 GON4LQ3T8J9 2241 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 SPAG17Q6Q759 2223 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 NCOR2Q9Y618 2525 aa10.16□□□□□ -0.78
SSBP3-215ENST00000533946 SOBPA7XYQ1 873 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 SGK1O00141 431 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 GDF9O60383 454 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 ADAM23O75077 832 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 PNMA6AP0CW24 399 aaPredicted RBP10.15□□□□□ -0.78
SSBP3-215ENST00000533946 P4HA1P13674 534 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 SLC9A1P19634 815 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 WASP42768 502 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 CCR3P51677 355 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 LRRC63Q05C16 580 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 SPEM2Q0P670 501 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 KCNH2Q12809 1159 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 GRSF1Q12849 480 aaKnown RBP eCLIP10.15□□□□□ -0.78
SSBP3-215ENST00000533946 LRRC32Q14392 662 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 CCDC40Q4G0X9 1142 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 PKDCCQ504Y2 493 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 DGKKQ5KSL6 1271 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 DPY19L2P1Q6NXN4 242 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 PRR23BQ6ZRT6 265 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 TPGS1Q6ZTW0 290 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 ETFBKMTQ8IXQ9 262 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 FAM160A2Q8N612 972 aaPredicted RBP10.15□□□□□ -0.78
SSBP3-215ENST00000533946 ALLCQ8N6M5 410 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 USP33Q8TEY7 942 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 EDEM1Q92611 657 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 ATP2A3Q93084 1043 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 MYEOVQ96EZ4 313 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 TSG101Q99816 390 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 TPSD1Q9BZJ3 242 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 ULBP1Q9BZM6 244 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 SLC6A17Q9H1V8 727 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 EPC1Q9H2F5 836 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 CD93Q9NPY3 652 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 CHMP5Q9NZZ3 219 aa10.15□□□□□ -0.78
SSBP3-215ENST00000533946 KIAA1468Q9P260 1216 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms