RNA–Protein interactions for RNA: ENST00000533776.1

BRCA2-205, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 3

Gene BRCA2, Length 523 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-205ENST00000533776 HGFP14210 728 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 SLC7A1P30825 629 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 UQCRC1P31930 480 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 THBS3P49746 956 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 TIRAPP58753 221 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 YPEL5P62699 121 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 CFHR1Q03591 330 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 ANO7Q6IWH7 933 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 VSTM1Q6UX27 236 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 PIM3Q86V86 326 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.63□□□□□ -1.83
BRCA2-205ENST00000533776 C16orf71Q8IYS4 520 aaPredicted RBP3.63□□□□□ -1.83
BRCA2-205ENST00000533776 ZBTB34Q8NCN2 500 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 ACRBPQ8NEB7 543 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 OR56A3Q8NH54 315 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 SPSB4Q96A44 273 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 RHOBTB2Q9BYZ6 727 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 ATP6V0A4Q9HBG4 840 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 WWOXQ9NZC7 414 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 DNMT3BQ9UBC3 853 aaKnown RBP3.63□□□□□ -1.83
BRCA2-205ENST00000533776 MGAT4CQ9UBM8 478 aa3.63□□□□□ -1.83
BRCA2-205ENST00000533776 PNMA8BQ9ULN7 279 aaPredicted RBP3.63□□□□□ -1.83
BRCA2-205ENST00000533776 H7C4K7 107 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 TMPRSS11DO60235 418 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 RASSF9O75901 435 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 CRYABP02511 175 aaKnown RBP3.62□□□□□ -1.83
BRCA2-205ENST00000533776 EN2P19622 333 aaPredicted RBP3.62□□□□□ -1.83
BRCA2-205ENST00000533776 ME1P48163 572 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 NANOS2P60321 138 aaKnown RBP3.62□□□□□ -1.83
BRCA2-205ENST00000533776 RPS13P62277 151 aaKnown RBP3.62□□□□□ -1.83
BRCA2-205ENST00000533776 SLC14A1Q13336 389 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 PIN1Q13526 163 aaPredicted RBP3.62□□□□□ -1.83
BRCA2-205ENST00000533776 MFSD13AQ14CX5 517 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 PTPROQ16827 1216 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 INSCQ1MX18 579 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 DEF8Q6ZN54 512 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 ARFGAP1Q8N6T3 406 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 IL31RAQ8NI17 732 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 WDYHV1Q96HA8 205 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 GPATCH3Q96I76 525 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 B3GNT5Q9BYG0 378 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 TRIM5Q9C035 493 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 ZNF518BQ9C0D4 1074 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 A1CFQ9NQ94 594 aaKnown RBP3.62□□□□□ -1.83
BRCA2-205ENST00000533776 HS3ST3B1Q9Y662 390 aa3.62□□□□□ -1.83
BRCA2-205ENST00000533776 TRIP12Q14669 1992 aaPredicted RBP3.62□□□□□ -1.83
BRCA2-205ENST00000533776 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 MBD3L4A6NDZ8 208 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 MBD3L3A6NE82 208 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 B4DGG1 531 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 AGPSO00116 658 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 CLIC1O00299 241 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 EXOC5O00471 708 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 TBX3O15119 743 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 RRP9O43818 475 aaKnown RBP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 CNOT3O75175 753 aaKnown RBP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 CTSAP10619 480 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 ATF7P17544 494 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 MCM5P33992 734 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 PTDSS1P48651 473 aaKnown RBP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 PGDP52209 483 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 TIAL1Q01085 375 aaKnown RBP eCLIP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 SRSF1Q07955 248 aaKnown RBP eCLIP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 SLC9C1Q4G0N8 1177 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 ANO6Q4KMQ2 910 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 B3GNT9Q6UX72 402 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 NPNTQ6UXI9 565 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 C9orf47Q6ZRZ4 202 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 COLCA1Q6ZS62 124 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 TPH2Q8IWU9 490 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 SLC35G2Q8TBE7 412 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 JPH3Q8WXH2 748 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-205ENST00000533776 ZFYVE19Q96K21 471 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 AIFM3Q96NN9 605 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 TAAR9Q96RI9 348 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 STK31Q9BXU1 1019 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 FAM234AQ9H0X4 552 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 XPNPEP3Q9NQH7 507 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 SACM1LQ9NTJ5 587 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 ZNF180Q9UJW8 692 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 ASAP1Q9ULH1 1129 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 MAFFQ9ULX9 164 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
BRCA2-205ENST00000533776 LOC102723971A0A1B0GUV8 181 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 FAM90A8PA6NJQ4 464 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 PRR23D1E9PI22 279 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-205ENST00000533776 PYCARD-AS1I3L0S3 204 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 MARCH6O60337 910 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 ALDH1L1O75891 902 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 PIAS2O75928 621 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 TOMM40O96008 361 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 FAM90A13PP0C7W8 464 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 FAM90A24PP0C7X0 464 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 PRR23D2P0DMB1 279 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-205ENST00000533776 IBSPP21815 317 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-205ENST00000533776 KLRC1P26715 233 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 CPA2P48052 419 aa3.6□□□□□ -1.83
BRCA2-205ENST00000533776 AGFG1P52594 562 aaKnown RBP3.6□□□□□ -1.83
BRCA2-205ENST00000533776 SUMO3P55854 103 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-205ENST00000533776 CFHR3Q02985 330 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms