RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 IRF9Q00978 393 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 DSG1Q02413 1049 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CDK18Q07002 472 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CACNB2Q08289 660 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 AP1B1Q10567 949 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 GNA13Q14344 377 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 TSC22D1Q15714 1073 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 ZNF124Q15973 351 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CFAP221Q4G0U5 840 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PAN2Q504Q3 1202 aaKnown RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 BRDTQ58F21 947 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 KCNT1Q5JUK3 1230 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 METTL24Q5JXM2 366 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PHF19Q5T6S3 580 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 BTBD8Q5XKL5 378 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 OR7E24Q6IFN5 339 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 NEK5Q6P3R8 708 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 TEPPQ6URK8 271 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CD300LDQ6UXZ3 194 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 LIPIQ6XZB0 460 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 ATG14Q6ZNE5 492 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 Q6ZNX1 250 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 IKBIPQ70UQ0 350 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 RHOUQ7L0Q8 258 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 OTOP1Q7RTM1 612 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 ATG9AQ7Z3C6 839 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PROSER1Q86XN7 944 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 C12orf56Q8IXR9 622 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PPM1KQ8N3J5 372 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 ENAHQ8N8S7 591 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 CNBD1Q8NA66 436 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 DDHD1Q8NEL9 900 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 SLC2A14Q8TDB8 520 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 PANK1Q8TE04 598 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 FBXO41Q8TF61 875 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 LPIN2Q92539 896 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CIDECQ96AQ7 238 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 SGF29Q96ES7 293 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 FAM84AQ96KN4 292 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PPP1R13BQ96KQ4 1090 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 EGLN2Q96KS0 407 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 IFT74Q96LB3 600 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CIB1Q99828 191 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 YIPF4Q9BSR8 244 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CSRNP2Q9H175 543 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 KCNMB3Q9NPA1 279 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CCDC177Q9NQR7 707 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 C9orf78Q9NZ63 289 aaPredicted RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 PTTG2Q9NZH5 202 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 B4GALT6Q9UBX8 382 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 SLC7A8Q9UHI5 535 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 FBXL5Q9UKA1 691 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 DUSP12Q9UNI6 340 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 CHMP2BQ9UQN3 213 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 ZBTB1Q9Y2K1 713 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 TSC22D4Q9Y3Q8 395 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 PCDHB6Q9Y5E3 794 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 SNX5Q9Y5X3 404 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.79□□□□□ -1.48
CD44-236ENST00000533222 AKAP12Q02952 1782 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 FAM135BQ49AJ0 1406 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 POGZQ7Z3K3 1410 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 SBNO1A3KN83 1393 aa5.79□□□□□ -1.48
CD44-236ENST00000533222 MYOM2P54296 1465 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 LRRC9Q6ZRR7 1453 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 GOLGA8QA0A0J9YX86 632 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 GOLGA8OA6NCC3 632 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 MAGEA13PA6NCF6 341 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 PRAMEF25A6NGN4 478 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 E9PBE3 544 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 GOLGA8NF8WBI6 632 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 INO80B-WBP1J3KQ70 363 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 PPIP5K2O43314 1243 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 ZBTB14O43829 449 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 RANBP6O60518 1105 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 FGF18O76093 207 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 DDHD2O94830 711 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 SEC31AO94979 1220 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 OR5F1O95221 314 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 PABPC4LP0CB38 370 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 ATP2A2P16615 1042 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 FAHP16930 419 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 PI3P19957 117 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 TMOD1P28289 359 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 TMED10P49755 219 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 ADARP55265 1226 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 RPL26P61254 145 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 GFPT1Q06210 699 aaPredicted RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 SLFN5Q08AF3 891 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 DCTN2Q13561 401 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 IQGAP2Q13576 1575 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 PDE1CQ14123 709 aaPredicted RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 STK11Q15831 433 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 IMMTQ16891 758 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 GLE1Q53GS7 698 aaKnown RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 ANKRD20A8PQ5CZ79 823 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 ANKRD20A2Q5SQ80 823 aa5.78□□□□□ -1.48
CD44-236ENST00000533222 ZNF362Q5T0B9 420 aaPredicted RBP5.78□□□□□ -1.48
CD44-236ENST00000533222 ANKRD20A1Q5TYW2 823 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms