RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 KIAA1468Q9P260 1216 aa18.18■□□□□ 0.5
PHRF1-204ENST00000532550 SCAMP3O14828 347 aaKnown RBP18.17■□□□□ 0.5
PHRF1-204ENST00000532550 PMM2O15305 246 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 RNF40O75150 1001 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 FGFR1OPO95684 399 aaKnown RBP18.17■□□□□ 0.5
PHRF1-204ENST00000532550 PGFP49763 221 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 KIF11P52732 1056 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 DHCR24Q15392 516 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 ARHGAP17Q68EM7 881 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 NAIF1Q69YI7 327 aaPredicted RBP18.17■□□□□ 0.5
PHRF1-204ENST00000532550 CCDC26Q8TAB7 109 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 RUBCNQ92622 972 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 OTUB2Q96DC9 234 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 UBXN6Q9BZV1 441 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 SLC8A2Q9UPR5 921 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 MYOFQ9NZM1 2061 aa18.17■□□□□ 0.5
PHRF1-204ENST00000532550 CHURC1-FNTBB4DL54 471 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 K7ESF4 209 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 P4HA2O15460 535 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 CYP26A1O43174 497 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 TBX18O95935 607 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 ADH1CP00326 375 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 CYP17A1P05093 508 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 FNTBP49356 437 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 PSEN1P49768 467 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 SGO2Q562F6 1265 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 HEATR6Q6AI08 1181 aaKnown RBP18.16■□□□□ 0.5
PHRF1-204ENST00000532550 RHBDF2Q6PJF5 856 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 LONP2Q86WA8 852 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 ANKRD52Q8NB46 1076 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 SECISBP2LQ93073 1101 aaKnown RBP18.16■□□□□ 0.5
PHRF1-204ENST00000532550 ZFRQ96KR1 1074 aaKnown RBP18.16■□□□□ 0.5
PHRF1-204ENST00000532550 NT5C1BQ96P26 610 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 EPC1Q9H2F5 836 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 CYLDQ9NQC7 956 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 C2orf42Q9NWW7 574 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 NAGPAQ9UK23 515 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 RAB23Q9ULC3 237 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 KIAA1257Q9ULG3 409 aa18.16■□□□□ 0.5
PHRF1-204ENST00000532550 GVINP1Q7Z2Y8 2422 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 WDR87Q6ZQQ6 2873 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 A0A1W2PQH9 124 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 CCDC192P0DO97 292 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 IRF1P10914 325 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 RALAP11233 206 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 RARGP13631 454 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 CD19P15391 556 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 CNR2P34972 360 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 GOLGA8FQ08AF8 430 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 GOLGA8DPQ0D2H9 430 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 KCNH2Q12809 1159 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 CCDC186Q7Z3E2 898 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 TADA2BQ86TJ2 420 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 OSER1Q9NX31 292 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 NCDNQ9UBB6 729 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 HESX1Q9UBX0 185 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.15■□□□□ 0.5
PHRF1-204ENST00000532550 USP3Q9Y6I4 520 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 OTOGLQ3ZCN5 2332 aa18.15■□□□□ 0.5
PHRF1-204ENST00000532550 VDRP11473 427 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 HOXA6P31267 233 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 OPRD1P41143 372 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 PLA2G4AP47712 749 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 GAD2Q05329 585 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 DMWDQ09019 674 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 C10orf120Q5SQS8 335 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 LY6G5CQ5SRR4 150 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 PKN3Q6P5Z2 889 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 KLHDC10Q6PID8 442 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 PIGZQ86VD9 579 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 CREBRFQ8IUR6 639 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 TRIM59Q8IWR1 403 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 PPM1KQ8N3J5 372 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 EHBP1Q8NDI1 1231 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 RPLP0P6Q8NHW5 317 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 PNKPQ96T60 521 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 KLF16Q9BXK1 252 aaPredicted RBP18.14■□□□□ 0.49
PHRF1-204ENST00000532550 NMUR1Q9HB89 426 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.14■□□□□ 0.495e-6■■□□□ 12
PHRF1-204ENST00000532550 DNMT3LQ9UJW3 386 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 SMG5Q9UPR3 1016 aaKnown RBP18.14■□□□□ 0.49
PHRF1-204ENST00000532550 PCDHB4Q9Y5E5 795 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 CFAP54Q96N23 3096 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 MYO16Q9Y6X6 1858 aa18.14■□□□□ 0.49
PHRF1-204ENST00000532550 GPR179Q6PRD1 2367 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 AFPP02771 609 aaKnown RBP18.13■□□□□ 0.49
PHRF1-204ENST00000532550 ADH5P11766 374 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 SLC6A11P48066 632 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 MARSP56192 900 aaKnown RBP18.13■□□□□ 0.49
PHRF1-204ENST00000532550 SIM2Q14190 667 aaPredicted RBP18.13■□□□□ 0.49
PHRF1-204ENST00000532550 GOLGA7BQ2TAP0 167 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 BTBD8Q5XKL5 378 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 TMEM270Q6UE05 265 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 PRR23BQ6ZRT6 265 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 HTR3DQ70Z44 454 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 BBS7Q8IWZ6 715 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 ARHGAP18Q8N392 663 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 ZNF276Q8N554 614 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 DCLK2Q8N568 766 aa18.13■□□□□ 0.49
PHRF1-204ENST00000532550 CDK5RAP1Q96SZ6 601 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms