RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 RPL13P26373 211 aaKnown RBP17.8■□□□□ 0.44
CPSF1-207ENST00000531727 GCLMP48507 274 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 PPP3CAQ08209 521 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 MESP2Q0VG99 397 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 LY6G5CQ5SRR4 150 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 C12orf40Q86WS4 652 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 CCDC33Q8N5R6 958 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 IMPG2Q9BZV3 1241 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 GOLPH3LQ9H4A5 285 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.8■□□□□ 0.447e-6■■■■■ 74.5
CPSF1-207ENST00000531727 MYH10P35580 1976 aa17.8■□□□□ 0.44
CPSF1-207ENST00000531727 A0A0A0MRY4 1105 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-207ENST00000531727 DCLK1O15075 740 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 TLR5O60602 858 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 CHRM1P11229 460 aaPredicted RBP17.79■□□□□ 0.44
CPSF1-207ENST00000531727 ADORA2BP29275 332 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 PSMC2P35998 433 aaKnown RBP17.79■□□□□ 0.44
CPSF1-207ENST00000531727 MPLP40238 635 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 PGFP49763 221 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 LIMK1P53667 647 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 GAD2Q05329 585 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 RASSF3Q86WH2 238 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 SFTPA1Q8IWL2 248 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 TAS1R2Q8TE23 839 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 TWNKQ96RR1 684 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 HNRNPABQ99729 332 aaKnown RBP17.79■□□□□ 0.44
CPSF1-207ENST00000531727 TPSD1Q9BZJ3 242 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 NIF3L1Q9GZT8 377 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 NACA2Q9H009 215 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 CYP3A43Q9HB55 503 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 APOBEC3GQ9HC16 384 aaKnown RBP17.79■□□□□ 0.44
CPSF1-207ENST00000531727 ARHGEF4Q9NR80 690 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 TLR8Q9NR97 1041 aaKnown RBP17.79■□□□□ 0.44
CPSF1-207ENST00000531727 VPS45Q9NRW7 570 aa17.79■□□□□ 0.44
CPSF1-207ENST00000531727 HOXC11O43248 304 aaPredicted RBP17.78■□□□□ 0.44
CPSF1-207ENST00000531727 ZNF202O95125 648 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 GRIA2P42262 883 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 TNFRSF4P43489 277 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 KDSRQ06136 332 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 ADAM9Q13443 819 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 CRY1Q16526 586 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 HSF5Q4G112 596 aaPredicted RBP17.78■□□□□ 0.44
CPSF1-207ENST00000531727 ZCWPW2Q504Y3 356 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 USP39Q53GS9 565 aaKnown RBP17.78■□□□□ 0.44
CPSF1-207ENST00000531727 PPM1JQ5JR12 505 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 ANO7Q6IWH7 933 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 CLEC20AQ6ZU45 233 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 GPRIN1Q7Z2K8 1008 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 C11orf74Q86VG3 221 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 BBS7Q8IWZ6 715 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 PHTF2Q8N3S3 785 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 ALLCQ8N6M5 410 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 IL17RCQ8NAC3 791 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 WBP2Q969T9 261 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 CNOT6LQ96LI5 555 aaKnown RBP17.78■□□□□ 0.44
CPSF1-207ENST00000531727 NT5C1AQ9BXI3 368 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 TMEM8AQ9HCN3 771 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 SCML2Q9UQR0 700 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 MYOFQ9NZM1 2061 aa17.78■□□□□ 0.44
CPSF1-207ENST00000531727 HHLA1C9JL84 531 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 CILPO75339 1184 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 IRF1P10914 325 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 TIE1P35590 1138 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 KIR2DL1P43626 348 aaPredicted RBP17.77■□□□□ 0.44
CPSF1-207ENST00000531727 MCCD1P59942 119 aaPredicted RBP17.77■□□□□ 0.44
CPSF1-207ENST00000531727 BTBD8Q5XKL5 378 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 IL31Q6EBC2 164 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 TMEM92Q6UXU6 159 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 ETFBKMTQ8IXQ9 262 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 TXNDC5Q8NBS9 432 aaKnown RBP17.77■□□□□ 0.44
CPSF1-207ENST00000531727 CCDC150Q8NCX0 1101 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 DDX1Q92499 740 aaKnown RBP17.77■□□□□ 0.44
CPSF1-207ENST00000531727 CYFIP2Q96F07 1278 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 SMOC1Q9H4F8 434 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 MMRN2Q9H8L6 949 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 PNPLA8Q9NP80 782 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 SPHK2Q9NRA0 654 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 RXFP3Q9NSD7 469 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 INVSQ9Y283 1065 aa17.77■□□□□ 0.44
CPSF1-207ENST00000531727 SGK1O00141 431 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 CYP26A1O43174 497 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 ALDH1A2O94788 518 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 KLF8O95600 359 aaPredicted RBP17.76■□□□□ 0.43
CPSF1-207ENST00000531727 TBX18O95935 607 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 ADRB1P08588 477 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 HNRNPLP14866 589 aaKnown RBP eCLIP17.76■□□□□ 0.43
CPSF1-207ENST00000531727 CD58P19256 250 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 GBP1P32455 592 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 GTF2H1P32780 548 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 EDRF1Q3B7T1 1238 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 PREPLQ4J6C6 727 aaPredicted RBP17.76■□□□□ 0.43
CPSF1-207ENST00000531727 EOGTQ5NDL2 527 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 EMC10Q5UCC4 262 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 PMS2CLQ68D20 193 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 HTR3DQ70Z44 454 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 MDGA1Q8NFP4 955 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 WHAMMQ8TF30 809 aa17.76■□□□□ 0.43
CPSF1-207ENST00000531727 JAKMIP2Q96AA8 810 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms