RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.52
NXF1-211ENST00000531709 E5RJQ4 531 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 MICAL2O94851 1124 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 TRIP10Q15642 601 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 ZC3H12AQ5D1E8 599 aaKnown RBP11.77□□□□□ -0.53
NXF1-211ENST00000531709 ADGRD1Q6QNK2 874 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 CES3Q6UWW8 571 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 POLNQ7Z5Q5 900 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 ZNF354CQ86Y25 554 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 TMEM176AQ96HP8 235 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 CPB2Q96IY4 423 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 FAM167AQ96KS9 214 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 CORO1CQ9ULV4 474 aaPredicted RBP11.77□□□□□ -0.53
NXF1-211ENST00000531709 LRCH1Q9Y2L9 728 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 TTLL13PA6NNM8 815 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 SPAG6O75602 509 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 PDE5AO76074 875 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 ALADP13716 330 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 TMEM62Q0P6H9 643 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 RNF220Q5VTB9 566 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 ASRGL1Q7L266 308 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.77□□□□□ -0.53
NXF1-211ENST00000531709 MAB21L3Q8N8X9 362 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 CLUHO75153 1309 aa11.77□□□□□ -0.53
NXF1-211ENST00000531709 ATP9BO43861 1147 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 GARSP41250 739 aaKnown RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 NME3Q13232 169 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 UBAP2LQ14157 1087 aaKnown RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 ACSBG2Q5FVE4 666 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 TMEM63BQ5T3F8 832 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 TLDC1Q6P9B6 456 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 MPZL3Q6UWV2 235 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 PID1Q7Z2X4 250 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 TDRPQ86YL5 185 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 TMPRSS6Q8IU80 811 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 UTP4Q969X6 686 aaKnown RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 CNPY3Q9BT09 278 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 DNAI2Q9GZS0 605 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 TAS2R1Q9NYW7 299 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 KLHL8Q9P2G9 620 aaPredicted RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 PACSIN3Q9UKS6 424 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 SNCAIPQ9Y6H5 919 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 EME2A4GXA9 379 aaPredicted RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 A8MXQ7 604 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 TBC1D12O60347 775 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 GMPSP49915 693 aaPredicted RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 SLC25A3Q00325 362 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 GOLGA7BQ2TAP0 167 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 DNAL1Q4LDG9 190 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 C12orf29Q8N999 325 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 UCMAQ8WVF2 138 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 PYDC1Q8WXC3 89 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 MED10Q9BTT4 135 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 NT5C1AQ9BXI3 368 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 MAST2Q6P0Q8 1798 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 STAMBPO95630 424 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 ERBB2P04626 1255 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 ACADSP16219 412 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 UBA1P22314 1058 aaKnown RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 SP2Q02086 613 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 MOGSQ13724 837 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 OASLQ15646 514 aaKnown RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
NXF1-211ENST00000531709 TNFAIP8L3Q5GJ75 292 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 GLRA4Q5JXX5 417 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 EEF1DP3Q658K8 133 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 CDKL3Q8IVW4 592 aaPredicted RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 ST13P4Q8IZP2 240 aaPredicted RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 RAB3IL1Q8TBN0 382 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 SLC7A6OSQ96CW6 309 aaPredicted RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 TRIM56Q9BRZ2 755 aaKnown RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
NXF1-211ENST00000531709 TSPAN16Q9UKR8 245 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 WASF2Q9Y6W5 498 aa11.76□□□□□ -0.53
NXF1-211ENST00000531709 AIM2O14862 343 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 LGR5O75473 907 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 DGKIO75912 1065 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 USP1O94782 785 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 EGFRP00533 1210 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 NFICP08651 508 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 STAG3L1P0CL83 205 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 TXNP10599 105 aaKnown RBP11.75□□□□□ -0.53
NXF1-211ENST00000531709 PHKA2P46019 1235 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 PAPOLAP51003 745 aaKnown RBP11.75□□□□□ -0.53
NXF1-211ENST00000531709 NDST1P52848 882 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 TMEM132DQ14C87 1099 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 BANPQ8N9N5 519 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 PRR11Q96HE9 360 aaPredicted RBP11.75□□□□□ -0.53
NXF1-211ENST00000531709 TAGLN3Q9UI15 199 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 RREB1Q92766 1687 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 E7ENQ6 273 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 SMAPO00193 183 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 TP73O15350 636 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 TYROBPO43914 113 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 FASTKD1Q53R41 847 aaKnown RBP11.75□□□□□ -0.53
NXF1-211ENST00000531709 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 SLC35B2Q8TB61 432 aa11.75□□□□□ -0.53
NXF1-211ENST00000531709 PIM2Q9P1W9 311 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms