RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 KIAA0391O15091 583 aaKnown RBP5.09□□□□□ -1.59
USP47-211ENST00000531513 KCNQ3O43525 872 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 SNX2O60749 519 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 GNAI2P04899 355 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 FCER1AP12319 257 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 BTF3P20290 206 aaKnown RBP5.09□□□□□ -1.59
USP47-211ENST00000531513 GPD1P21695 349 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 IL1R2P27930 398 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 RXRGP48443 463 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 SLC11A2P49281 568 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 COPAP53621 1224 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 UCP3P55916 312 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 POLE2P56282 527 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 TIGD6Q17RP2 521 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 ARL6IP4Q66PJ3 421 aaKnown RBP5.09□□□□□ -1.59
USP47-211ENST00000531513 AOPEPQ8N6M6 819 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 C9orf106Q8NAJ2 232 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 NLGN4YQ8NFZ3 816 aaPredicted RBP5.09□□□□□ -1.59
USP47-211ENST00000531513 OTUD7AQ8TE49 926 aaPredicted RBP5.09□□□□□ -1.59
USP47-211ENST00000531513 DDB2Q92466 427 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 DDX17Q92841 729 aaKnown RBP5.09□□□□□ -1.59
USP47-211ENST00000531513 NEUROD6Q96NK8 337 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 MED15Q96RN5 788 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 SEC62Q99442 399 aaKnown RBP5.09□□□□□ -1.59
USP47-211ENST00000531513 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.09□□□□□ -1.59
USP47-211ENST00000531513 GPR35Q9HC97 309 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 GGA3Q9NZ52 723 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 SCAF8Q9UPN6 1271 aaKnown RBP5.09□□□□□ -1.59
USP47-211ENST00000531513 TMX2Q9Y320 296 aa5.09□□□□□ -1.59
USP47-211ENST00000531513 ITIH6Q6UXX5 1313 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 WDR91A4D1P6 747 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 MANSC4A6NHS7 340 aaPredicted RBP5.08□□□□□ -1.6
USP47-211ENST00000531513 MYO1CO00159 1063 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 YY2O15391 372 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 RASSF9O75901 435 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 HAUS5O94927 633 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 MBD4O95243 580 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 TNFRSF6BO95407 300 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 ANXA1P04083 346 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 GRPP07492 148 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 CKMT1AP12532 417 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 IDEP14735 1019 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 PSMC1P62191 440 aaKnown RBP5.08□□□□□ -1.6
USP47-211ENST00000531513 AMOTQ4VCS5 1084 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 SULT6B1Q6IMI4 303 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 KRTAP5-11Q6L8G4 156 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 VWA1Q6PCB0 445 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 USP17L6PQ6QN14 398 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 KRBA2Q6ZNG9 492 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 C1orf122Q6ZSJ8 110 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 USP49Q70CQ1 688 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 ZNF365Q70YC5 407 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 PTF1AQ7RTS3 328 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 USP37Q86T82 979 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 ZNF366Q8N895 744 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 Q8N9P0 234 aaPredicted RBP5.08□□□□□ -1.6
USP47-211ENST00000531513 TBC1D15Q8TC07 691 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 SPPL3Q8TCT6 385 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 ASB12Q8WXK4 309 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 SPSB4Q96A44 273 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 KATNAL1Q9BW62 490 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 SLC26A6Q9BXS9 759 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 RIC8AQ9NPQ8 531 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 WASH6PQ9NQA3 447 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 VPS45Q9NRW7 570 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 RASSF1Q9NS23 344 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 KIF17Q9P2E2 1029 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 MID2Q9UJV3 735 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 SLC13A4Q9UKG4 626 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 SLC45A2Q9UMX9 530 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 TMEM98Q9Y2Y6 226 aa5.08□□□□□ -1.6
USP47-211ENST00000531513 A0A087WZ62 844 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 ORC4O43929 436 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 RNASEH2AO75792 299 aaKnown RBP5.07□□□□□ -1.6
USP47-211ENST00000531513 FAM155BO75949 473 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 INMTO95050 263 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 POLBP06746 335 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 WT1P19544 449 aaPredicted RBP5.07□□□□□ -1.6
USP47-211ENST00000531513 CNTFP26441 200 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 ELF1P32519 619 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 KCTD2Q14681 263 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 MAPKAPK3Q16644 382 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 FAM110CQ1W6H9 321 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 ARHGAP15Q53QZ3 475 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 TSTD2Q5T7W7 516 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 FAAH2Q6GMR7 532 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 LIN54Q6MZP7 749 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 ZDHHC24Q6UX98 284 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.07□□□□□ -1.6
USP47-211ENST00000531513 KIAA0408Q6ZU52 694 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 LRRTM4Q86VH4 590 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 TMTC1Q8IUR5 882 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 FTSJ3Q8IY81 847 aaKnown RBP5.07□□□□□ -1.6
USP47-211ENST00000531513 ESX1Q8N693 406 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 TFAP2BQ92481 460 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 RUBCNQ92622 972 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 SCAMP4Q969E2 229 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 TMEM125Q96AQ2 219 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 NELL2Q99435 816 aa5.07□□□□□ -1.6
USP47-211ENST00000531513 PRPF18Q99633 342 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms