RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 MRPL44Q9H9J2 332 aaKnown RBP5.5□□□□□ -1.53
PTPRK-220ENST00000531466 SEMA4BQ9NPR2 832 aaPredicted RBP5.5□□□□□ -1.53
PTPRK-220ENST00000531466 ZSCAN32Q9NX65 697 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 FER1L4A9Z1Z3 1794 aa5.5□□□□□ -1.53
PTPRK-220ENST00000531466 WASHC2CQ9Y4E1 1318 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 CLIC1O00299 241 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 SLC28A2O43868 658 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 SRGAP2O75044 1071 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 MTHFSP49914 203 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 RAB1AP62820 205 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 FGL2Q14314 439 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 TMEM240Q5SV17 173 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 TMEM63BQ5T3F8 832 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 ZNF783Q6ZMS7 281 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 B4GALNT2Q8NHY0 566 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 WIPF2Q8TF74 440 aaPredicted RBP5.49□□□□□ -1.53
PTPRK-220ENST00000531466 ASB5Q8WWX0 329 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 SLC25A28Q96A46 364 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 WDYHV1Q96HA8 205 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 MAP3K14Q99558 947 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 VN1R3Q9BXE9 311 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 TRIM54Q9BYV2 358 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 TXLNGQ9NUQ3 528 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 GAR1Q9NY12 217 aaKnown RBP5.49□□□□□ -1.53
PTPRK-220ENST00000531466 SPEF1Q9Y4P9 236 aa5.49□□□□□ -1.53
PTPRK-220ENST00000531466 TTBK1Q5TCY1 1321 aaPredicted RBP5.48□□□□□ -1.53
PTPRK-220ENST00000531466 ALG1L2C9J202 215 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 BTN3A1O00481 513 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 TMPRSS11DO60235 418 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 FGF2P09038 288 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 MT3P25713 68 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 EPHA3P29320 983 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 UQCRC1P31930 480 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 HSF1Q00613 529 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 UBE2Q1Q7Z7E8 422 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 HPS3Q969F9 1004 aa5.48□□□□□ -1.53
PTPRK-220ENST00000531466 ZBTB45Q96K62 511 aaPredicted RBP5.48□□□□□ -1.53
PTPRK-220ENST00000531466 LUC7L2Q9Y383 392 aaKnown RBP5.48□□□□□ -1.53
PTPRK-220ENST00000531466 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.47□□□□□ -1.53
PTPRK-220ENST00000531466 EME2A4GXA9 379 aaPredicted RBP5.47□□□□□ -1.53
PTPRK-220ENST00000531466 KRT86O43790 486 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 PLA2G2AP14555 144 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 NPR1P16066 1061 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 TACR3P29371 465 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 ARFIP2P53365 341 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 TIRAPP58753 221 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 ZXDBP98169 803 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 CFHR3Q02985 330 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 KRT81Q14533 505 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 DCAF12L1Q5VU92 463 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 KBTBD7Q8WVZ9 684 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 ZNF479Q96JC4 524 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 CDY1Q9Y6F8 540 aa5.47□□□□□ -1.53
PTPRK-220ENST00000531466 ERVV-2B6SEH9 535 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 INPPL1O15357 1258 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 RASAL1O95294 804 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 NGFRP08138 427 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 AKAP5P24588 427 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 PRTGQ2VWP7 1150 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 MANEAQ5SRI9 462 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 CACHD1Q5VU97 1274 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 ZDHHC24Q6UX98 284 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 OR6B3Q8NGW1 331 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 EDC3Q96F86 508 aaKnown RBP5.46□□□□□ -1.54
PTPRK-220ENST00000531466 TMEM45AQ9NWC5 275 aa5.46□□□□□ -1.54
PTPRK-220ENST00000531466 RGS10O43665 173 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 SYF2O95926 243 aaKnown RBP5.45□□□□□ -1.54
PTPRK-220ENST00000531466 MCM5P33992 734 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 B4GALNT1Q00973 533 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 AMPD3Q01432 767 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 SLC13A2Q13183 592 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 KPNB1Q14974 876 aaKnown RBP5.45□□□□□ -1.54
PTPRK-220ENST00000531466 PFKFB3Q16875 520 aaPredicted RBP5.45□□□□□ -1.54
PTPRK-220ENST00000531466 KCTD20Q7Z5Y7 419 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 HIC2Q96JB3 615 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 NT5C1BQ96P26 610 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 TMEM204Q9BSN7 226 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 TMEM8AQ9HCN3 771 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.45□□□□□ -1.54
PTPRK-220ENST00000531466 ASAP1Q9ULH1 1129 aa5.45□□□□□ -1.54
PTPRK-220ENST00000531466 A0A088AWK7 358 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 C2CD4BA6NLJ0 364 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 EXOC5O00471 708 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 FYB1O15117 783 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 KITP10721 976 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 HGFP14210 728 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 CDC25AP30304 524 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 DEUP1Q05D60 604 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 ZNF267Q14586 743 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-220ENST00000531466 B4GALNT4Q76KP1 1039 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 C12orf76Q8N812 135 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-220ENST00000531466 TRMT61AQ96FX7 289 aaKnown RBP5.44□□□□□ -1.54
PTPRK-220ENST00000531466 KAZALD1Q96I82 304 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 TM2D2Q9BX73 214 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 TRIM5Q9C035 493 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 USP29Q9HBJ7 922 aa5.44□□□□□ -1.54
PTPRK-220ENST00000531466 SIRT4Q9Y6E7 314 aaPredicted RBP5.44□□□□□ -1.54
PTPRK-220ENST00000531466 CD3EAPO15446 510 aaKnown RBP5.43□□□□□ -1.54
PTPRK-220ENST00000531466 TBC1D4O60343 1298 aa5.43□□□□□ -1.54
PTPRK-220ENST00000531466 IL6STP40189 918 aaPredicted RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms