RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 GAD2Q05329 585 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 INCA1Q0VD86 236 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 AASDHQ4L235 1098 aaPredicted RBP23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 LY6G5CQ5SRR4 150 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 BTBD8Q5XKL5 378 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 CCDC33Q8N5R6 958 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 ZFRQ96KR1 1074 aaKnown RBP23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 NIF3L1Q9GZT8 377 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 APOBEC3GQ9HC16 384 aaKnown RBP23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 TMEM8AQ9HCN3 771 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 ARHGEF4Q9NR80 690 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 PCDHGA5Q9Y5G8 931 aa23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 KIF26AQ9ULI4 1882 aaPredicted RBP23.55■■□□□ 1.36
TRAPPC4-210ENST00000531290 ZNF806P0C7X5 589 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 CD58P19256 250 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 GRIA2P42262 883 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 NUCB2P80303 420 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 CCDC6Q16204 474 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 PLK5Q496M5 336 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 USP39Q53GS9 565 aaKnown RBP23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 JAKMIP2Q96AA8 810 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 TWNKQ96RR1 684 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 RMND1Q9NWS8 449 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 MMP17Q9ULZ9 603 aa23.54■■□□□ 1.36
TRAPPC4-210ENST00000531290 GOLGA6L4A6NEF3 574 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 CETN3O15182 167 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 GDF9O60383 454 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 IRF1P10914 325 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 SF3A2Q15428 464 aaKnown RBP23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 EDRF1Q3B7T1 1238 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 PREPLQ4J6C6 727 aaPredicted RBP23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 KRT39Q6A163 491 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 TTC30AQ86WT1 665 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 BBS7Q8IWZ6 715 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 SCML2Q9UQR0 700 aa23.53■■□□□ 1.36
TRAPPC4-210ENST00000531290 A0A0A0MRY4 1105 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 DCLK1O15075 740 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 STX10O60499 249 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 ALDH1A2O94788 518 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 TBX18O95935 607 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 ACO1P21399 889 aaKnown RBP23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 GBP1P32455 592 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 TIE1P35590 1138 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 ATP5C1P36542 298 aaKnown RBP23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 TNFRSF4P43489 277 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 PGFP49763 221 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 GOLGA8FQ08AF8 430 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 GOLGA8DPQ0D2H9 430 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 CRY1Q16526 586 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 ANO4Q32M45 955 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 HSF5Q4G112 596 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 ZCWPW2Q504Y3 356 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 ANO7Q6IWH7 933 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 CLEC20AQ6ZU45 233 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 NUDT18Q6ZVK8 323 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 C11orf74Q86VG3 221 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 C12orf40Q86WS4 652 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 SMYD4Q8IYR2 804 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 NAT16Q8N8M0 369 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 EEF2KMTQ96G04 330 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 DUSP9Q99956 384 aaKnown RBP23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 DUSP15Q9H1R2 295 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 SPHK2Q9NRA0 654 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 DENND4CQ5VZ89 1909 aa23.52■■□□□ 1.36
TRAPPC4-210ENST00000531290 OBSL1O75147 1896 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 TBC1D3BA6NDS4 549 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 ANTXRLA6NF34 631 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 CILPO75339 1184 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 EPB41P11171 864 aaKnown RBP23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 KDSRQ06136 332 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 EOGTQ5NDL2 527 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 GPRIN1Q7Z2K8 1008 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 SFTPA1Q8IWL2 248 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 TTC39CQ8N584 583 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 ALLCQ8N6M5 410 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 TXNDC5Q8NBS9 432 aaKnown RBP23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 HEXIM2Q96MH2 286 aaKnown RBP23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 TPSD1Q9BZJ3 242 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 PNPLA8Q9NP80 782 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 VPS45Q9NRW7 570 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 DEC1Q9P2X7 70 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 INVSQ9Y283 1065 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 PCDHA5Q9Y5H7 936 aa23.51■■□□□ 1.35
TRAPPC4-210ENST00000531290 HHLA1C9JL84 531 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 CYP26A1O43174 497 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 HOXC11O43248 304 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 KLF8O95600 359 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 MPLP40238 635 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 MESP2Q0VG99 397 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 PNOCQ13519 176 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 ZNF394Q53GI3 561 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 EMC10Q5UCC4 262 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 IL31Q6EBC2 164 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 HTR3DQ70Z44 454 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 TMEM25Q86YD3 366 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 IL17RCQ8NAC3 791 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 WHAMMQ8TF30 809 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 FAXDC2Q96IV6 333 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 CNOT6LQ96LI5 555 aaKnown RBP23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 KLF16Q9BXK1 252 aaPredicted RBP23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms