RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 RESTQ13127 1097 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 HS1BP3Q53T59 392 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 LYSMD4Q5XG99 296 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 PAQR9Q6ZVX9 377 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 LPCAT2Q7L5N7 544 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 BRAPQ7Z569 592 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 SLC41A1Q8IVJ1 513 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 DEFB119Q8N690 84 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 KIAA1958Q8N8K9 716 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 NOC3LQ8WTT2 800 aaKnown RBP9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 CEP295NLQ96MC4 621 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 B3GNT5Q9BYG0 378 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 CAPN10Q9HC96 672 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 ARHGEF4Q9NR80 690 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 EXOC7Q9UPT5 735 aa9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 GOLGA4Q13439 2230 aaKnown RBP9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 NYNRINQ9P2P1 1898 aaKnown RBP9.79□□□□□ -0.84
CHMP4A-205ENST00000531158 FAM221BA6H8Z2 402 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 UPK3BL1B0FP48 263 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 UPK3BL2E5RIL1 263 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 TRIM66O15016 1216 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 COCHO43405 550 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 GREM1O60565 184 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 TULP3O75386 442 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 BMP15O95972 392 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 APODP05090 189 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 CD59P13987 128 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 IDEP14735 1019 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 PDCP20941 246 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 GRIA2P42262 883 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 SIM1P81133 766 aaPredicted RBP9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 IFRD2Q12894 506 aaPredicted RBP9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 LMAN2Q12907 356 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 MYO1EQ12965 1108 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 RRAGBQ5VZM2 374 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 TRAPPC11Q7Z392 1133 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 ZNF605Q86T29 641 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 BBS7Q8IWZ6 715 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 SYCP3Q8IZU3 236 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 NAT16Q8N8M0 369 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 CCDC26Q8TAB7 109 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 SCAMP5Q8TAC9 235 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 ZNF516Q92618 1163 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 ELMO3Q96BJ8 720 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 ERLEC1Q96DZ1 483 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 KCNK16Q96T55 309 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 ACOX2Q99424 681 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 XYLT2Q9H1B5 865 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 CCSER2Q9H7U1 834 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 RRAGDQ9NQL2 400 aaPredicted RBP9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 PANK4Q9NVE7 773 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 TMEM63CQ9P1W3 806 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 CALCOCO1Q9P1Z2 691 aa9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 SRPRBQ9Y5M8 271 aaKnown RBP9.78□□□□□ -0.84
CHMP4A-205ENST00000531158 PLXNA2O75051 1894 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 IGHV1OR15-9A0A0B4J2B8 117 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 ESPNB1AK53 854 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 HOXC11O43248 304 aaPredicted RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 TGFB1I1O43294 461 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 TACC1O75410 805 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 GJB3O75712 270 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 ALDH1A2O94788 518 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 LETM1O95202 739 aaPredicted RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 ADH1CP00326 375 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 ABL1P00519 1130 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 MBL2P11226 248 aaPredicted RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 PTPN1P18031 435 aaKnown RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 ANXA13P27216 316 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 WASP42768 502 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 TNFRSF4P43489 277 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 PDE6CP51160 858 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 MAPRE1Q15691 268 aaKnown RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 HSF5Q4G112 596 aaPredicted RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 SPDYCQ5MJ68 293 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 EOGTQ5NDL2 527 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 EGFLAMQ63HQ2 1017 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 SV2BQ7L1I2 683 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 EPM2AIP1Q7L775 607 aaPredicted RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 HS2ST1Q7LGA3 356 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 TMEM25Q86YD3 366 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 WDR49Q8IV35 697 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 CHCHD4Q8N4Q1 142 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 TERB1Q8NA31 727 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 PLEKHO2Q8TD55 490 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 ANKRD36BP1Q96IX9 119 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 PDLIM2Q96JY6 352 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 SPACA7Q96KW9 195 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 CAMK1GQ96NX5 476 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 MMS19Q96T76 1030 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 NUSAP1Q9BXS6 441 aaKnown RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 SLC6A17Q9H1V8 727 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 POLMQ9NP87 494 aaPredicted RBP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 IL37Q9NZH6 218 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 HSPBP1Q9NZL4 362 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 BCCIPQ9P287 314 aaKnown RBP eCLIP9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 CCDC39Q9UFE4 941 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 PCDHB13Q9Y5F0 798 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 RAI2Q9Y5P3 530 aa9.77□□□□□ -0.85
CHMP4A-205ENST00000531158 CFAP46Q8IYW2 2715 aa9.76□□□□□ -0.85
CHMP4A-205ENST00000531158 E2F8A0AVK6 867 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms