RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 ENGASEQ8NFI3 743 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 MYCBPAPQ8TBZ2 947 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 KBTBD7Q8WVZ9 684 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 OVCA2Q8WZ82 227 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 LARP4BQ92615 738 aaKnown RBP11.09□□□□□ -0.63
COPB1-207ENST00000529866 PCED1BQ96HM7 432 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 ACCSQ96QU6 501 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 XPO6Q96QU8 1125 aaKnown RBP11.09□□□□□ -0.63
COPB1-207ENST00000529866 GABRG3Q99928 467 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 ELOVL4Q9GZR5 314 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 CRTAC1Q9NQ79 661 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 SPHK2Q9NRA0 654 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 BLOC1S4Q9NUP1 217 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 DNAJC17Q9NVM6 304 aaKnown RBP11.09□□□□□ -0.63
COPB1-207ENST00000529866 SEL1LQ9UBV2 794 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 ZNF462Q96JM2 2506 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 KALRNO60229 2985 aa11.09□□□□□ -0.63
COPB1-207ENST00000529866 PCDH15Q96QU1 1955 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 TK2O00142 265 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 ATP2C2O75185 946 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 RTN3O95197 1032 aaPredicted RBP11.08□□□□□ -0.64
COPB1-207ENST00000529866 TNNC2P02585 160 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 PDGFRBP09619 1106 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 GARTP22102 1010 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 WARSP23381 471 aaKnown RBP11.08□□□□□ -0.64
COPB1-207ENST00000529866 LMO2P25791 158 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 YWHAQP27348 245 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 DDIT3P35638 169 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 MATKP42679 507 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 TUBP50607 506 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 WNT7BP56706 349 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 CYP4F3Q08477 520 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 IFRD2Q12894 506 aaPredicted RBP11.08□□□□□ -0.64
COPB1-207ENST00000529866 STARD3Q14849 445 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 MDH1BQ5I0G3 518 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 L1TD1Q5T7N2 865 aaKnown RBP11.08□□□□□ -0.64
COPB1-207ENST00000529866 HS2ST1Q7LGA3 356 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 SFR1Q86XK3 245 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 MIB1Q86YT6 1006 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 ZCCHC9Q8N567 271 aaKnown RBP11.08□□□□□ -0.64
COPB1-207ENST00000529866 CXorf38Q8TB03 319 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 NOC3LQ8WTT2 800 aaKnown RBP11.08□□□□□ -0.64
COPB1-207ENST00000529866 FBXO32Q969P5 355 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 HPDLQ96IR7 371 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 MMS19Q96T76 1030 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 NACA2Q9H009 215 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 MIR1-1HGQ9H1L0 117 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 SNX25Q9H3E2 840 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 GAREM1Q9H706 876 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 MRPL44Q9H9J2 332 aaKnown RBP11.08□□□□□ -0.64
COPB1-207ENST00000529866 TM7SF3Q9NS93 570 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 PCDHGB2Q9Y5G2 931 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 OBSL1O75147 1896 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 MYO16Q9Y6X6 1858 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 NAV2Q8IVL1 2488 aa11.08□□□□□ -0.64
COPB1-207ENST00000529866 DENND4CQ5VZ89 1909 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 GFRA2O00451 464 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 COCHO43405 550 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 CILPO75339 1184 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 PPP1R37O75864 691 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 BMP15O95972 392 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 NCAM1P13591 858 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 MAOBP27338 520 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 SUZ12Q15022 739 aaKnown RBP11.07□□□□□ -0.64
COPB1-207ENST00000529866 LIMS2Q7Z4I7 341 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 SYCP3Q8IZU3 236 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 PDCD7Q8N8D1 485 aaKnown RBP11.07□□□□□ -0.64
COPB1-207ENST00000529866 CADM4Q8NFZ8 388 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 RHBDD1Q8TEB9 315 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 DNASE2BQ8WZ79 361 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 TOE1Q96GM8 510 aaKnown RBP11.07□□□□□ -0.64
COPB1-207ENST00000529866 ZFRQ96KR1 1074 aaKnown RBP11.07□□□□□ -0.64
COPB1-207ENST00000529866 MRGPRX1Q96LB2 322 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 IKZF4Q9H2S9 585 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 PRDM16Q9HAZ2 1276 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 PDE11AQ9HCR9 933 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 ATP8B3O60423 1300 aa11.07□□□□□ -0.64
COPB1-207ENST00000529866 SPTA1P02549 2419 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 PLXND1Q9Y4D7 1925 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 GOLGA8IPA6NC78 632 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 TRABD2BA6NFA1 517 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 GOLGA8JA6NMD2 632 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 E9PAM4 449 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 NEDD8-MDP1E9PL57 170 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 KIAA0391O15091 583 aaKnown RBP11.06□□□□□ -0.64
COPB1-207ENST00000529866 BCAT2O15382 392 aaPredicted RBP11.06□□□□□ -0.64
COPB1-207ENST00000529866 CACNG3O60359 315 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 DKK1O94907 266 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 GCNT3O95395 438 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 GAP43P17677 238 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 LONP1P36776 959 aaKnown RBP11.06□□□□□ -0.64
COPB1-207ENST00000529866 GNL1P36915 607 aaPredicted RBP11.06□□□□□ -0.64
COPB1-207ENST00000529866 GOLGA8FQ08AF8 430 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 GOLGA8DPQ0D2H9 430 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 ALCAMQ13740 583 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 SURF1Q15526 300 aa11.06□□□□□ -0.64
COPB1-207ENST00000529866 DUOXA2Q1HG44 320 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms