RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 GABPB2Q8TAK5 448 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 PYDC1Q8WXC3 89 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 SCG3Q8WXD2 468 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 CYP4F12Q9HCS2 524 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 WDR27A2RRH5 827 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 DCAF8L1A6NGE4 600 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 CYB561D2O14569 222 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 ACO1P21399 889 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 UBA1P22314 1058 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 ECHS1P30084 290 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 GNL1P36915 607 aaPredicted RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 WDR4P57081 412 aaKnown RBP10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 KCNT2Q6UVM3 1135 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 VSTM1Q6UX27 236 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 BRSK2Q8IWQ3 736 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 CLPTM1LQ96KA5 538 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 PORCNQ9H237 461 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 ATXN3LQ9H3M9 355 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 AURKCQ9UQB9 309 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 V9GYQ6 96 aa10.27□□□□□ -0.77
CCDC90B-214ENST00000529689 hCG_1818297A0A087WSY0 165 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 RNF103-CHMP3A0A140T963 221 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 NCAM1P13591 858 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 CYP2F1P24903 491 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 NME5P56597 212 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 SLC25A3Q00325 362 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 NSUN2Q08J23 767 aaKnown RBP eCLIP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 BST1Q10588 318 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 MPP2Q14168 576 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 PTPN20Q4JDL3 420 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 N4BP2L1Q5TBK1 243 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 FAM83AQ86UY5 434 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 APOBEC3FQ8IUX4 373 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 ALLCQ8N6M5 410 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 AFG1LQ8WV93 481 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 ZNF516Q92618 1163 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 USP13Q92995 863 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 B3GNT5Q9BYG0 378 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 PRMT7Q9NVM4 692 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 CYP39A1Q9NYL5 469 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 ERAP1Q9NZ08 941 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 GGA2Q9UJY4 613 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 AP4E1Q9UPM8 1137 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 EEF2KO00418 725 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 DCXO43602 365 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 HMBSP08397 361 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 TGM2P21980 687 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 NCKAP1LP55160 1127 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 MRPS35P82673 323 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 PDK4Q16654 411 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 FAM13CQ8NE31 585 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 OXNAD1Q96HP4 312 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 CELF6Q96J87 481 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 MFSD14AQ96MC6 490 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 MBOAT7Q96N66 472 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 CPXM1Q96SM3 734 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 BTBD10Q9BSF8 475 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 GCOM2Q9BZD3 368 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 ZCWPW1Q9H0M4 648 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 AP5M1Q9H0R1 490 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 XPNPEP1Q9NQW7 623 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 DDIT4Q9NX09 232 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 ADGRA3Q8IWK6 1321 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 TMEM191CA6NGB0 347 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 HBP1O60381 514 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 POLBP06746 335 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 MMP8P22894 467 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 COPAP53621 1224 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 FNBP1LQ5T0N5 605 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 XRRA1Q6P2D8 792 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 TTC7BQ86TV6 843 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 DEFB107AQ8IZN7 70 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 SAMD3Q8N6K7 520 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 TFB1MQ8WVM0 346 aaKnown RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 TFAP2BQ92481 460 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 VCPIP1Q96JH7 1222 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 ZNF317Q96PQ6 595 aaPredicted RBP10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 OSMRQ99650 979 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 ARL8BQ9NVJ2 186 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 SNTG2Q9NY99 539 aa10.26□□□□□ -0.77
CCDC90B-214ENST00000529689 TCRBV9S1A1TA0A576 114 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 UBA6A0AVT1 1052 aaPredicted RBP10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 EDF1O60869 148 aaKnown RBP10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 PROCP04070 461 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 ERVK-10P10266 1014 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 MGAT1P26572 445 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 PTGER2P43116 358 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 GDF10P55107 478 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 HSDL1Q3SXM5 330 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 HSP90AA5PQ58FG0 334 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 LRRC8EQ6NSJ5 796 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 COLGALT1Q8NBJ5 622 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 APPL2Q8NEU8 664 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 EDEM1Q92611 657 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 PABPC5Q96DU9 382 aaKnown RBP10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 VPS39Q96JC1 886 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 CHST12Q9NRB3 414 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 TELO2Q9Y4R8 837 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 LAMA4Q16363 1823 aa10.25□□□□□ -0.77
CCDC90B-214ENST00000529689 EGFRP00533 1210 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms