RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 CRTC1Q6UUV9 634 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 KRBA2Q6ZNG9 492 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 Q6ZWC4 215 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 KRT28Q7Z3Y7 464 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 WDR53Q7Z5U6 358 aaPredicted RBP6.86□□□□□ -1.31
PCF11-202ENST00000528336 KIAA1191Q96A73 305 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 ZC3H10Q96K80 434 aaKnown RBP6.86□□□□□ -1.31
PCF11-202ENST00000528336 SGCZQ96LD1 299 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 INO80BQ9C086 356 aaPredicted RBP6.86□□□□□ -1.31
PCF11-202ENST00000528336 DUSP22Q9NRW4 184 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 C11orf21Q9P2W6 132 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 DNAJB11Q9UBS4 358 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 COMMD10Q9Y6G5 202 aa6.86□□□□□ -1.31
PCF11-202ENST00000528336 COL11A2P13942 1736 aaPredicted RBP6.85□□□□□ -1.31
PCF11-202ENST00000528336 CLCA1A8K7I4 914 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 SNX2O60749 519 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 NDST3O95803 873 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 PRKCBP05771 671 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 HNRNPCP07910 306 aaKnown RBP eCLIP6.85□□□□□ -1.31
PCF11-202ENST00000528336 DLDP09622 509 aaKnown RBP6.85□□□□□ -1.31
PCF11-202ENST00000528336 DRD4P21917 467 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 CTGFP29279 349 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 TIRAPP58753 221 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 TIAL1Q01085 375 aaKnown RBP eCLIP6.85□□□□□ -1.31
PCF11-202ENST00000528336 L1TD1Q5T7N2 865 aaKnown RBP6.85□□□□□ -1.31
PCF11-202ENST00000528336 MZT2AQ6P582 158 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 CLEC9AQ6UXN8 241 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 BRI3BPQ8WY22 251 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 GJA10Q969M2 543 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 ZNF566Q969W8 418 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 PRR25Q96S07 402 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 VN1R3Q9BXE9 311 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 SLITRK6Q9H5Y7 841 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 ADAMTS5Q9UNA0 930 aa6.85□□□□□ -1.31
PCF11-202ENST00000528336 EXOC5O00471 708 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 CES2O00748 559 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 PDE8BO95263 885 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 NPSP0C0P6 89 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 ABCB4P21439 1286 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 GPD1P21695 349 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 ITPKBP27987 946 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 SERPINB3P29508 390 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 COPAP53621 1224 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 BRD3Q15059 726 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 CYP1B1Q16678 543 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 SLC35G1Q2M3R5 365 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 TBC1D25Q3MII6 688 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 AARS2Q5JTZ9 985 aaKnown RBP6.84□□□□□ -1.31
PCF11-202ENST00000528336 FBXO42Q6P3S6 717 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 NAPRTQ6XQN6 538 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 MORC1Q86VD1 984 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 RAB11FIP4Q86YS3 637 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 BOLLQ8N9W6 283 aaKnown RBP6.84□□□□□ -1.31
PCF11-202ENST00000528336 FANCBQ8NB91 859 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 ABHD11Q8NFV4 315 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 RP9Q8TA86 221 aaKnown RBP6.84□□□□□ -1.31
PCF11-202ENST00000528336 DEPTORQ8TB45 409 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 ZNF668Q96K58 619 aaPredicted RBP6.84□□□□□ -1.31
PCF11-202ENST00000528336 TIMP4Q99727 224 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 ZNF700Q9H0M5 742 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 SLC25A32Q9H2D1 315 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 PRDM13Q9H4Q3 707 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 SEMA4GQ9NTN9 838 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 LPAR3Q9UBY5 353 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 ADAM21Q9UKJ8 722 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 GABRQQ9UN88 632 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 ERCC6Q03468 1493 aa6.84□□□□□ -1.31
PCF11-202ENST00000528336 PMPCBO75439 489 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 WDHD1O75717 1129 aaPredicted RBP6.83□□□□□ -1.32
PCF11-202ENST00000528336 IGLV2-14P01704 120 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 GKP32189 559 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 INHBEP58166 350 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 XRRA1Q6P2D8 792 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 USP49Q70CQ1 688 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 SLC29A4Q7RTT9 530 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 METTL25Q8N6Q8 603 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 SIRT6Q8N6T7 355 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 SNX27Q96L92 541 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 FAM227BQ96M60 508 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 LENG8Q96PV6 779 aaPredicted RBP6.83□□□□□ -1.32
PCF11-202ENST00000528336 MPHOSPH6Q99547 160 aaKnown RBP6.83□□□□□ -1.32
PCF11-202ENST00000528336 FSD1LQ9BXM9 530 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 KRTAP4-2Q9BYR5 136 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 RIMKLBQ9ULI2 386 aa6.83□□□□□ -1.32
PCF11-202ENST00000528336 ZMYND8Q9ULU4 1186 aaPredicted RBP6.83□□□□□ -1.32
PCF11-202ENST00000528336 SPATA31A6Q5VVP1 1343 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 FANCD2Q9BXW9 1451 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 COQ9O75208 318 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 CREB1P16220 341 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 EEF1GP26641 437 aaKnown RBP6.82□□□□□ -1.32
PCF11-202ENST00000528336 HSPA7P48741 367 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 MPEG1Q2M385 716 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 FAXCQ5TGI0 409 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 FBXO38Q6PIJ6 1188 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 ADGRG3Q86Y34 549 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 FSTL5Q8N475 847 aaPredicted RBP6.82□□□□□ -1.32
PCF11-202ENST00000528336 GLIS1Q8NBF1 620 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 RSPRY1Q96DX4 576 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 MACROD1Q9BQ69 325 aa6.82□□□□□ -1.32
PCF11-202ENST00000528336 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms