RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 SPHK2Q9NRA0 654 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 TM7SF3Q9NS93 570 aa17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 FNDC3AQ9Y2H6 1198 aaKnown RBP17.31■□□□□ 0.36
CHMP4A-203ENST00000527154 TRIM24O15164 1050 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 CACNG3O60359 315 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 CER1O95813 267 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 IGLV3-19P01714 112 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 C7P10643 843 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 PLCG1P19174 1290 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 MAOBP27338 520 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 CD6P30203 668 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 GRIK1P39086 918 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 ABCG1P45844 678 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 TFAMQ00059 246 aaKnown RBP17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 IL27RAQ6UWB1 636 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 NUDT18Q6ZVK8 323 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 ZNF720Q7Z2F6 126 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 TMEM25Q86YD3 366 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 MARCH9Q86YJ5 346 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 RGL4Q8IZJ4 473 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 ZSWIM2Q8NEG5 633 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 MYCBPAPQ8TBZ2 947 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 OVCA2Q8WZ82 227 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 IL37Q9NZH6 218 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 NME7Q9Y5B8 376 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 KNL1Q8NG31 2342 aa17.3■□□□□ 0.36
CHMP4A-203ENST00000527154 PRRT4C9JH25 899 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 F8VP50 259 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 COCHO43405 550 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 WARSP23381 471 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 TUBP50607 506 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 NEK4P51957 841 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 PSMC1P62191 440 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 RBP5P82980 135 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 BBS7Q8IWZ6 715 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 ZNF843Q8N446 348 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 NAT16Q8N8M0 369 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 CACTINQ8WUQ7 758 aaKnown RBP17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 POMGNT1Q8WZA1 660 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 AK8Q96MA6 479 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 GAREM1Q9H706 876 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 ITM2CQ9NQX7 267 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 MARK1Q9P0L2 795 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 RAI2Q9Y5P3 530 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 SHROOM3Q8TF72 1996 aa17.29■□□□□ 0.36
CHMP4A-203ENST00000527154 FAM92AA1XBS5 289 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 ZDHHC11BP0C7U3 371 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 MBL2P11226 248 aaPredicted RBP17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 MATKP42679 507 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 WASP42768 502 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 CACNA2D1P54289 1103 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 ENPP2Q13822 863 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 RILPL1Q5EBL4 403 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 BTBD8Q5XKL5 378 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 CCDC83Q8IWF9 413 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 CHPFQ8IZ52 775 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 CSGALNACT2Q8N6G5 542 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 SETD7Q8WTS6 366 aaKnown RBP17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 WBP2Q969T9 261 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 CDK5RAP3Q96JB5 506 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 FAM84AQ96KN4 292 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 SLITRK1Q96PX8 696 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 SLC6A17Q9H1V8 727 aa17.28■□□□□ 0.36
CHMP4A-203ENST00000527154 MGAQ8IWI9 3026 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 VWA3AA6NCI4 1184 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 METTL12A8MUP2 240 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 NDUFS2O75306 463 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 FAM163BP0C2L3 166 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 ANXA13P27216 316 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 HLA-BQ31612 363 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 TDRD10Q5VZ19 366 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 ZCCHC9Q8N567 271 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 PDZD8Q8NEN9 1154 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 TOE1Q96GM8 510 aaKnown RBP17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 FAM213AQ9BRX8 229 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 MTMR12Q9C0I1 747 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 FBXO10Q9UK96 956 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 LIMCH1Q9UPQ0 1083 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 BTBD3Q9Y2F9 522 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 ATMQ13315 3056 aa17.27■□□□□ 0.36
CHMP4A-203ENST00000527154 KCNJ18B7U540 433 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 BCAT2O15382 392 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 ZBTB24O43167 697 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 PAPSS1O43252 624 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 TNFSF14O43557 240 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 CISD3P0C7P0 127 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 NCAM1P13591 858 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 GARTP22102 1010 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 EIF2S3P41091 472 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 ZNF132P52740 706 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 KCNA1Q09470 495 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 MCM6Q14566 821 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 GRAMD4Q6IC98 578 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 PCSK4Q6UW60 755 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 HTR3DQ70Z44 454 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 RAD54LQ92698 747 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 KIF2CQ99661 725 aa17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 MKRN2Q9H000 416 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-203ENST00000527154 OSGEPQ9NPF4 335 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms