RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 CBLBQ13191 982 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 BOLA3Q53S33 107 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 SLC9A4Q6AI14 798 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 SCYL2Q6P3W7 929 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 TBC1D1Q86TI0 1168 aaPredicted RBP18.32■□□□□ 0.52
USH1C-205ENST00000527020 RTP4Q96DX8 246 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 SNRNP25Q9BV90 132 aaKnown RBP18.32■□□□□ 0.52
USH1C-205ENST00000527020 DPEP3Q9H4B8 488 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 RNF19AQ9NV58 838 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 KLHL14Q9P2G3 628 aa18.32■□□□□ 0.52
USH1C-205ENST00000527020 EDF1O60869 148 aaKnown RBP18.31■□□□□ 0.52
USH1C-205ENST00000527020 SETSIPP0DME0 302 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 HDAC4P56524 1084 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 LVRNQ6Q4G3 990 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 ZNF276Q8N554 614 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 OR6J1Q8NGC5 347 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 PPP1R13LQ8WUF5 828 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 MAML3Q96JK9 1138 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 MORF4L1Q9UBU8 362 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 CHUKO15111 745 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 CHADO15335 359 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 AVILO75366 819 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 SDC4P31431 198 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 SOWAHAQ2M3V2 549 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 GLRA4Q5JXX5 417 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 SLC27A1Q6PCB7 646 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 ALKAL1Q6UXT8 129 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.31■□□□□ 0.52
USH1C-205ENST00000527020 FAF2Q96CS3 445 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 THOC1Q96FV9 657 aaKnown RBP18.31■□□□□ 0.52
USH1C-205ENST00000527020 FAM49AQ9H0Q0 323 aaPredicted RBP18.31■□□□□ 0.52
USH1C-205ENST00000527020 GINS2Q9Y248 185 aa18.31■□□□□ 0.52
USH1C-205ENST00000527020 TRIP12Q14669 1992 aaPredicted RBP18.31■□□□□ 0.52
USH1C-205ENST00000527020 TCRBV9S1A1TA0A576 114 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 KBTBD13C9JR72 458 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 ZWINTO95229 277 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 NQO1P15559 274 aaKnown RBP18.3■□□□□ 0.52
USH1C-205ENST00000527020 TGM2P21980 687 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 RBL1P28749 1068 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 MSH2P43246 934 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 GRB14Q14449 540 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 DGKDQ16760 1214 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 HHATQ5VTY9 493 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 GPR142Q7Z601 462 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 SESTD1Q86VW0 696 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 MAP7D3Q8IWC1 876 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 LRRC52Q8N7C0 313 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 BANPQ8N9N5 519 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 CLEC4CQ8WTT0 213 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 LRRN4Q8WUT4 740 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 C12orf65Q9H3J6 166 aaKnown RBP18.3■□□□□ 0.52
USH1C-205ENST00000527020 SLC45A1Q9Y2W3 748 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 HEY1Q9Y5J3 304 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 APOL1O14791 398 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 KCNN4O15554 427 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 MAP3K6O95382 1288 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 C1QAP02745 245 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 ADRA1DP25100 572 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 GCLCP48506 637 aaPredicted RBP18.3■□□□□ 0.52
USH1C-205ENST00000527020 ARHGAP17Q68EM7 881 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 ASRGL1Q7L266 308 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 CATSPER4Q7RTX7 472 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 LRRC8CQ8TDW0 803 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 STK32AQ8WU08 396 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 BRI3BPQ8WY22 251 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 TBCBQ99426 244 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 C11orf84Q9BUA3 381 aaPredicted RBP18.3■□□□□ 0.52
USH1C-205ENST00000527020 NXF3Q9H4D5 531 aaKnown RBP18.3■□□□□ 0.52
USH1C-205ENST00000527020 RAB6BQ9NRW1 208 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 PAK5Q9P286 719 aa18.3■□□□□ 0.52
USH1C-205ENST00000527020 ZNF638Q14966 1978 aaKnown RBP18.29■□□□□ 0.52
USH1C-205ENST00000527020 CCL15-CCL14A0A0B4J2E2 113 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 IGF2BP3O00425 579 aaKnown RBP eCLIP18.29■□□□□ 0.52
USH1C-205ENST00000527020 HGSO14964 777 aaPredicted RBP18.29■□□□□ 0.52
USH1C-205ENST00000527020 MDM4O15151 490 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 BCAR1P56945 870 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 YWHAZP63104 245 aaKnown RBP18.29■□□□□ 0.52
USH1C-205ENST00000527020 CCL15Q16663 113 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 C9orf57Q5W0N0 161 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 DPY19L2Q6NUT2 758 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 DPP9Q86TI2 863 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 VSIG1Q86XK7 387 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 TCP10LQ8TDR4 215 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 KBTBD7Q8WVZ9 684 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 ZNF75CPQ92670 426 aaPredicted RBP18.29■□□□□ 0.52
USH1C-205ENST00000527020 CYTH2Q99418 400 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 KLF6Q99612 283 aaPredicted RBP18.29■□□□□ 0.52
USH1C-205ENST00000527020 OSMRQ99650 979 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 MAGEB5Q9BZ81 275 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 CYLDQ9NQC7 956 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 CNTN3Q9P232 1028 aa18.29■□□□□ 0.52
USH1C-205ENST00000527020 BCLAF3A2AJT9 711 aaKnown RBP18.28■□□□□ 0.52
USH1C-205ENST00000527020 GOLGA8RI6L899 631 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 ATP6V1G2O95670 118 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 CCNB1P14635 433 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 ATXN1P54253 815 aaKnown RBP18.28■□□□□ 0.52
USH1C-205ENST00000527020 KBTBD12Q3ZCT8 623 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 UNC93AQ86WB7 457 aa18.28■□□□□ 0.52
USH1C-205ENST00000527020 BEST2Q8NFU1 509 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms