RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 GPR158Q5T848 1215 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 DPY19L2P1Q6NXN4 242 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 SV2AQ7L0J3 742 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 LIMS2Q7Z4I7 341 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 LMO3Q8TAP4 145 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 CEP76Q8TAP6 659 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 SEMA4DQ92854 862 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 PSMG2Q969U7 264 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 SUSD3Q96L08 255 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 BPIFA3Q9BQP9 254 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 OXCT2Q9BYC2 517 aaPredicted RBP11.65□□□□□ -0.54
NEDD8-204ENST00000526430 MTMR12Q9C0I1 747 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 XYLT2Q9H1B5 865 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 TASP1Q9H6P5 420 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 SLC38A7Q9NVC3 462 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 DNAAF2Q9NVR5 837 aaKnown RBP11.65□□□□□ -0.54
NEDD8-204ENST00000526430 PILRBQ9UKJ0 227 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 FRMD4BQ9Y2L6 1034 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 NFE2L3Q9Y4A8 694 aa11.65□□□□□ -0.54
NEDD8-204ENST00000526430 USP9XQ93008 2570 aaPredicted RBP11.65□□□□□ -0.55
NEDD8-204ENST00000526430 LRRC10BA6NIK2 292 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 J3QKU1 62 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 PODXLO00592 558 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 VNN2O95498 520 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 ITGB3P05106 788 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 P2RY2P41231 377 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 GCLMP48507 274 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 ATXN3P54252 364 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-204ENST00000526430 LILRA4P59901 499 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 ZNF445P59923 1031 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 DUOXA2Q1HG44 320 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 HSP90AA4PQ58FG1 418 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 MIIPQ5JXC2 388 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 INTS8Q75QN2 995 aaKnown RBP11.64□□□□□ -0.55
NEDD8-204ENST00000526430 RABEPKQ7Z6M1 372 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 GAS2L3Q86XJ1 694 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 ZNF843Q8N446 348 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 APPL2Q8NEU8 664 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 MDGA1Q8NFP4 955 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 EZH1Q92800 747 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-204ENST00000526430 ATXN3LQ9H3M9 355 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 EBF3Q9H4W6 596 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 CAPN10Q9HC96 672 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 ARMCX3Q9UH62 379 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-204ENST00000526430 SLC6A14Q9UN76 642 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 APOBEC2Q9Y235 224 aaKnown RBP11.64□□□□□ -0.55
NEDD8-204ENST00000526430 COQ4Q9Y3A0 265 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 MGAQ8IWI9 3026 aa11.64□□□□□ -0.55
NEDD8-204ENST00000526430 CAPN8A6NHC0 703 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 M0QZQ0 153 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 SERPINF2P08697 491 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 EPB41P11171 864 aaKnown RBP11.63□□□□□ -0.55
NEDD8-204ENST00000526430 TNNI1P19237 187 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 GABRR2P28476 465 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 POLR2BP30876 1174 aaKnown RBP11.63□□□□□ -0.55
NEDD8-204ENST00000526430 PTGER3P43115 390 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 ALDH1A3P47895 512 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 ZNF165P49910 485 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 GFPT1Q06210 699 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-204ENST00000526430 DUOXA1Q1HG43 343 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 LYSMD4Q5XG99 296 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 ANO7Q6IWH7 933 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 GLRX5Q86SX6 157 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 MINDY1Q8N5J2 469 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 TAS1R2Q8TE23 839 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 CACTINQ8WUQ7 758 aaKnown RBP11.63□□□□□ -0.55
NEDD8-204ENST00000526430 CRELD1Q96HD1 420 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 SPACA7Q96KW9 195 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 FNBP1Q96RU3 617 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 METTL14Q9HCE5 456 aaKnown RBP11.63□□□□□ -0.55
NEDD8-204ENST00000526430 KIAA1522Q9P206 1035 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-204ENST00000526430 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 AGAP1Q9UPQ3 857 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 NME7Q9Y5B8 376 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 CABIN1Q9Y6J0 2220 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 MYOFQ9NZM1 2061 aa11.63□□□□□ -0.55
NEDD8-204ENST00000526430 PMM2O15305 246 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 STAU1O95793 577 aaKnown RBP11.62□□□□□ -0.55
NEDD8-204ENST00000526430 GNA14O95837 355 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 CFIP05156 583 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 ATP1A3P13637 1013 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 CDC25CP30307 473 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 GTF2H1P32780 548 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 GJA4P35212 333 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 ABCG1P45844 678 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 MYL6P60660 151 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 MYL5Q02045 173 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 PDGFRLQ15198 375 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 TCP11X2Q5H9J9 407 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 TOGARAM2Q6ZUX3 1019 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 TMPRSS7Q7RTY8 843 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 DNAJB7Q7Z6W7 309 aaPredicted RBP11.62□□□□□ -0.55
NEDD8-204ENST00000526430 ITIH5Q86UX2 942 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 AOPEPQ8N6M6 819 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 CD101Q93033 1021 aa11.62□□□□□ -0.55
NEDD8-204ENST00000526430 GTPBP2Q9BX10 602 aaKnown RBP11.62□□□□□ -0.55
NEDD8-204ENST00000526430 CRISPLD1Q9H336 500 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms