RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 NFE2Q16621 373 aaPredicted RBP18.24■□□□□ 0.51
CCS-204ENST00000526066 TSR1Q2NL82 804 aaKnown RBP18.24■□□□□ 0.51
CCS-204ENST00000526066 ARHGAP17Q68EM7 881 aa18.24■□□□□ 0.51
CCS-204ENST00000526066 MFSD6LQ8IWD5 586 aa18.24■□□□□ 0.51
CCS-204ENST00000526066 MYCBPAPQ8TBZ2 947 aa18.24■□□□□ 0.51
CCS-204ENST00000526066 HEXIM2Q96MH2 286 aaKnown RBP18.24■□□□□ 0.51
CCS-204ENST00000526066 PARD6AQ9NPB6 346 aa18.24■□□□□ 0.51
CCS-204ENST00000526066 CRTAC1Q9NQ79 661 aa18.24■□□□□ 0.51
CCS-204ENST00000526066 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.23■□□□□ 0.51
CCS-204ENST00000526066 MYBPHLA2RUH7 354 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 ATP2C2O75185 946 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 CD19P15391 556 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 CYP11B1P15538 503 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 KCNA4P22459 653 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 GNA15P30679 374 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 VIPR2P41587 438 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 PDE6CP51160 858 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 ORC1Q13415 861 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 MEA1Q16626 185 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 SGO2Q562F6 1265 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 E4F1Q66K89 784 aaPredicted RBP18.23■□□□□ 0.51
CCS-204ENST00000526066 SLC47A2Q86VL8 602 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 ZNF677Q86XU0 584 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 HS6ST3Q8IZP7 471 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 SPEM1Q8N4L4 309 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 PANX2Q96RD6 677 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 TMEM209Q96SK2 561 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 C8orf33Q9H7E9 229 aaPredicted RBP18.23■□□□□ 0.51
CCS-204ENST00000526066 TRPV4Q9HBA0 871 aa18.23■□□□□ 0.51
CCS-204ENST00000526066 ZNHIT6Q9NWK9 470 aaKnown RBP18.23■□□□□ 0.51
CCS-204ENST00000526066 BZW2Q9Y6E2 419 aaKnown RBP18.23■□□□□ 0.51
CCS-204ENST00000526066 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.23■□□□□ 0.51
CCS-204ENST00000526066 RALGAPA1Q6GYQ0 2036 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 HEPACAM2A8MVW5 462 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 O00370 1275 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 DPYSL4O14531 572 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 MED7O43513 233 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 SERPING1P05155 500 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 TDGF1P13385 188 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 EPHB3P54753 998 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 MLLT6P55198 1093 aaPredicted RBP18.22■□□□□ 0.51
CCS-204ENST00000526066 CDK17Q00537 523 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 TEAD2Q15562 447 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 CNGA2Q16280 664 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 MDH1BQ5I0G3 518 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 PPM1JQ5JR12 505 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 HGSNATQ68CP4 663 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 C4orf50Q6ZRC1 276 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 CEP68Q76N32 757 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 LRRTM3Q86VH5 581 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 ZNF687Q8N1G0 1237 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 C12orf29Q8N999 325 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 EPS8L1Q8TE68 723 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 C2orf15Q8WU43 125 aaKnown RBP18.22■□□□□ 0.51
CCS-204ENST00000526066 ZNF606Q8WXB4 792 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 TFAP2BQ92481 460 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 DDX1Q92499 740 aaKnown RBP18.22■□□□□ 0.51
CCS-204ENST00000526066 CYFIP2Q96F07 1278 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 PCED1BQ96HM7 432 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 FUBP3Q96I24 572 aaKnown RBP eCLIP18.22■□□□□ 0.51
CCS-204ENST00000526066 ZSWIM3Q96MP5 696 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 HNRNPABQ99729 332 aaKnown RBP18.22■□□□□ 0.51
CCS-204ENST00000526066 SEMA4GQ9NTN9 838 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 NOCTQ9UK39 431 aaKnown RBP18.22■□□□□ 0.51
CCS-204ENST00000526066 GTF3C4Q9UKN8 822 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 COL4A2P08572 1712 aa18.22■□□□□ 0.51
CCS-204ENST00000526066 SHISA7A6NL88 538 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 SLC30A4O14863 429 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 ADRB1P08588 477 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 OR4Q2P0C623 313 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 GJA1P17302 382 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 TGM1P22735 817 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 FECHP22830 423 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 BRD2P25440 801 aaKnown RBP18.21■□□□□ 0.51
CCS-204ENST00000526066 ALDH1A3P47895 512 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 EPHA5P54756 1037 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 SATB1Q01826 763 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 ARID5AQ03989 594 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 GOLGA8FQ08AF8 430 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 GOLGA8DPQ0D2H9 430 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 KLHL30Q0D2K2 578 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 ST3GAL2Q16842 350 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 DGKKQ5KSL6 1271 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 WDR59Q6PJI9 974 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 POTEHQ6S545 545 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 LCLAT1Q6UWP7 414 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 NOP9Q86U38 636 aaKnown RBP18.21■□□□□ 0.51
CCS-204ENST00000526066 LONP2Q86WA8 852 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 FUKQ8N0W3 1084 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 ZSWIM1Q9BR11 485 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 SYT11Q9BT88 431 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 B3GNT5Q9BYG0 378 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 ABCB6Q9NP58 842 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 ACP6Q9NPH0 428 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 TMLHEQ9NVH6 421 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 PCDHGC3Q9UN70 934 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 YIPF1Q9Y548 306 aa18.21■□□□□ 0.51
CCS-204ENST00000526066 SLC38A8A6NNN8 435 aa18.2■□□□□ 0.5
CCS-204ENST00000526066 CHURC1-FNTBB4DL54 471 aa18.2■□□□□ 0.5
CCS-204ENST00000526066 CHADO15335 359 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms