RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 CYP21A2P08686 494 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 SPATA31D3P0C874 917 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 CYP2D6P10635 497 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 ALAS1P13196 640 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 VCAM1P19320 739 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 YY1P25490 414 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 ABHD18Q0P651 414 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 TRDNQ13061 729 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 TARDBPQ13148 414 aaKnown RBP eCLIP5.15□□□□□ -1.59
USP48-211ENST00000526044 KRT32Q14532 448 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 RAB39AQ14964 217 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 SLC4A8Q2Y0W8 1093 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 AKNAD1Q5T1N1 836 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 METRNLQ641Q3 311 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 SPATA31D4Q6ZUB0 917 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 TTC7BQ86TV6 843 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 PLXDC1Q8IUK5 500 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 HSPBAP1Q96EW2 488 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 NEK1Q96PY6 1258 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 REXO4Q9GZR2 422 aaKnown RBP5.15□□□□□ -1.59
USP48-211ENST00000526044 TMEM39BQ9GZU3 492 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 RNF41Q9H4P4 317 aaPredicted RBP5.15□□□□□ -1.59
USP48-211ENST00000526044 ZNF768Q9H5H4 540 aaKnown RBP5.15□□□□□ -1.59
USP48-211ENST00000526044 NRDE2Q9H7Z3 1164 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 MMRN2Q9H8L6 949 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 TCF7L1Q9HCS4 588 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 GGA3Q9NZ52 723 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 GPRC5BQ9NZH0 403 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 SWAP70Q9UH65 585 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 FZD1Q9UP38 647 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 ATP11BQ9Y2G3 1177 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 PCDHB1Q9Y5F3 818 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 SNX14Q9Y5W7 946 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 ZMYM6O95789 1325 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 CNTNAP1P78357 1384 aa5.15□□□□□ -1.59
USP48-211ENST00000526044 GOLGB1Q14789 3259 aaKnown RBP5.14□□□□□ -1.59
USP48-211ENST00000526044 E7EWF7 191 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 SMIM22K7EJ46 135 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 ZNF185O15231 689 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 IL33O95760 270 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 PCP11498 1178 aaKnown RBP5.14□□□□□ -1.59
USP48-211ENST00000526044 LAG3P18627 525 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 PDCP20941 246 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 PSMA5P28066 241 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 NF2P35240 595 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 TFAP4Q01664 338 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 PDCD4Q53EL6 469 aaKnown RBP5.14□□□□□ -1.59
USP48-211ENST00000526044 AGAP9Q5VTM2 703 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 IGFL4Q6B9Z1 124 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 RHOT2Q8IXI1 618 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 NLGN4YQ8NFZ3 816 aaPredicted RBP5.14□□□□□ -1.59
USP48-211ENST00000526044 NCOA7Q8NI08 942 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 IFI44Q8TCB0 444 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 KAT5Q92993 513 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 RAB24Q969Q5 203 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 LENG9Q96B70 501 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 CLIP3Q96DZ5 547 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 DYNLL2Q96FJ2 89 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 CLPTM1LQ96KA5 538 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 MRGPRX4Q96LA9 322 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 TM6SF1Q9BZW5 370 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 KRT23Q9C075 422 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 C11orf54Q9H0W9 315 aaPredicted RBP5.14□□□□□ -1.59
USP48-211ENST00000526044 AKIP1Q9NQ31 210 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 MAN1C1Q9NR34 630 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 CALCOCO1Q9P1Z2 691 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 C11orf21Q9P2W6 132 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 HERC5Q9UII4 1024 aaKnown RBP5.14□□□□□ -1.59
USP48-211ENST00000526044 G3BP2Q9UN86 482 aaKnown RBP5.14□□□□□ -1.59
USP48-211ENST00000526044 ANKRD6Q9Y2G4 727 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 USP15Q9Y4E8 981 aaPredicted RBP5.14□□□□□ -1.59
USP48-211ENST00000526044 CYP46A1Q9Y6A2 500 aa5.14□□□□□ -1.59
USP48-211ENST00000526044 NAV1Q8NEY1 1877 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 MYH8P13535 1937 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 TCRBV7S2A1N4TA0A589 114 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 E2F8A0AVK6 867 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 TSPY2A6NKD2 308 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 ADM5C9JUS6 153 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 KIAA0391O15091 583 aaKnown RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 RANBP6O60518 1105 aaKnown RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 PRDM1O75626 825 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 ITGB1P05556 798 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 ADH4P08319 380 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 TSPY3P0CV98 308 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 TSPY8P0CW00 308 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 MTHFD1P11586 935 aaKnown RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 NR4A1P22736 598 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 AKAP5P24588 427 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 MCM5P33992 734 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 NT5C2P49902 561 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 FAM189BP81408 668 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 DSC2Q02487 901 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 GABPAQ06546 454 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 KLF10Q13118 480 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 PRKG1Q13976 671 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 PLEKHG6Q3KR16 790 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 ADCK5Q3MIX3 580 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 CERKLQ49MI3 558 aaPredicted RBP5.13□□□□□ -1.59
USP48-211ENST00000526044 TIGD2Q4W5G0 525 aa5.13□□□□□ -1.59
USP48-211ENST00000526044 TATDN1Q6P1N9 297 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms