RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 MYADML2A6NDP7 307 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 AQP12BA6NM10 295 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 K7ENM7 598 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 PIP5K1BO14986 540 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 COQ9O75208 318 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 RPS6KA4O75676 772 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 GLP2RO95838 553 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 HNRNPMP52272 730 aaKnown RBP eCLIP5.37□□□□□ -1.55
CD44-220ENST00000525688 POLE2P56282 527 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 RPS7P62081 194 aaKnown RBP5.37□□□□□ -1.55
CD44-220ENST00000525688 MC2RQ01718 297 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 KRT17Q04695 432 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 NEXNQ0ZGT2 675 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 PRKG1Q13976 671 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 ICAM4Q14773 271 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 GLIPR1L2Q4G1C9 344 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 TMTC4Q5T4D3 741 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 FAXCQ5TGI0 409 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 B3GNTL1Q67FW5 361 aaPredicted RBP5.37□□□□□ -1.55
CD44-220ENST00000525688 RAP1GAP2Q684P5 730 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 SFRP4Q6FHJ7 346 aaPredicted RBP5.37□□□□□ -1.55
CD44-220ENST00000525688 MICALCLQ6ZW33 695 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 KCTD20Q7Z5Y7 419 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 NDUFAF2Q8N183 169 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 GALNT15Q8N3T1 639 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 FAM109AQ8N4B1 249 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 STYXQ8WUJ0 223 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 NELL1Q92832 810 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 TRIM63Q969Q1 353 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 ZNF668Q96K58 619 aaPredicted RBP5.37□□□□□ -1.55
CD44-220ENST00000525688 PPM1MQ96MI6 270 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 KATNAL1Q9BW62 490 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 TEX101Q9BY14 249 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 OSBPL5Q9H0X9 879 aaPredicted RBP5.37□□□□□ -1.55
CD44-220ENST00000525688 SH3GLB2Q9NR46 395 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 RASSF1Q9NS23 344 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 AURKAIP1Q9NWT8 199 aaPredicted RBP5.37□□□□□ -1.55
CD44-220ENST00000525688 TRPM5Q9NZQ8 1165 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 LRFN1Q9P244 771 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 ODF2LQ9ULJ1 636 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 DTNAQ9Y4J8 743 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 MYOM3Q5VTT5 1437 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 MIA2Q96PC5 1412 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 ATP10AO60312 1499 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 LMTK3Q96Q04 1460 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 HECW2Q9P2P5 1572 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 SIGLEC1Q9BZZ2 1709 aa5.37□□□□□ -1.55
CD44-220ENST00000525688 FAM170AA1A519 330 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 M0R3H8 397 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 TOR1BO14657 336 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 ERN1O75460 977 aaKnown RBP5.36□□□□□ -1.55
CD44-220ENST00000525688 PIAS2O75928 621 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 ZFPL1O95159 310 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 NTSR2O95665 410 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 NPPBP16860 134 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 MST1P26927 711 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 NSUN2Q08J23 767 aaKnown RBP eCLIP5.36□□□□□ -1.55
CD44-220ENST00000525688 WASHC5Q12768 1159 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 E2F2Q14209 437 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 KCNAB1Q14722 419 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 CYP2A13Q16696 494 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 ARHGAP15Q53QZ3 475 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 RABL3Q5HYI8 236 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 MANEALQ5VSG8 457 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 CACHD1Q5VU97 1274 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 SP5Q6BEB4 398 aaPredicted RBP5.36□□□□□ -1.55
CD44-220ENST00000525688 ARMC6Q6NXE6 501 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 RFX8Q6ZV50 586 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 ANKRD18AQ8IVF6 992 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 ADGRG5Q8IZF4 528 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 PPP2R3CQ969Q6 453 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 FUBP1Q96AE4 644 aaKnown RBP5.36□□□□□ -1.55
CD44-220ENST00000525688 ZDHHC12Q96GR4 267 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 EIF2AK1Q9BQI3 630 aaKnown RBP5.36□□□□□ -1.55
CD44-220ENST00000525688 SORBS1Q9BX66 1292 aaKnown RBP5.36□□□□□ -1.55
CD44-220ENST00000525688 CXorf36Q9H7Y0 433 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 NDRG4Q9ULP0 352 aaKnown RBP5.36□□□□□ -1.55
CD44-220ENST00000525688 SORCS3Q9UPU3 1222 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 HPSEQ9Y251 543 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 MTO1Q9Y2Z2 717 aaKnown RBP5.36□□□□□ -1.55
CD44-220ENST00000525688 SPAG9O60271 1321 aaKnown RBP5.36□□□□□ -1.55
CD44-220ENST00000525688 C9orf84Q5VXU9 1444 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 CAMSAP2Q08AD1 1489 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 REREQ9P2R6 1566 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 DIP2CQ9Y2E4 1556 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 KIDINS220Q9ULH0 1771 aa5.36□□□□□ -1.55
CD44-220ENST00000525688 BCORL1Q5H9F3 1711 aa5.35□□□□□ -1.55
CD44-220ENST00000525688 ADAMTSL3P82987 1691 aa5.35□□□□□ -1.55
CD44-220ENST00000525688 ABCA6Q8N139 1617 aa5.35□□□□□ -1.55
CD44-220ENST00000525688 INO80Q9ULG1 1556 aaPredicted RBP5.35□□□□□ -1.55
CD44-220ENST00000525688 CCDC141Q6ZP82 1450 aa5.35□□□□□ -1.55
CD44-220ENST00000525688 ITIH6Q6UXX5 1313 aa5.35□□□□□ -1.55
CD44-220ENST00000525688 A0A1B0GVC2 190 aa5.35□□□□□ -1.55
CD44-220ENST00000525688 PABPN1LA6NDY0 278 aaKnown RBP5.35□□□□□ -1.55
CD44-220ENST00000525688 RNASET2O00584 256 aaKnown RBP5.35□□□□□ -1.55
CD44-220ENST00000525688 TRIM38O00635 465 aa5.35□□□□□ -1.55
CD44-220ENST00000525688 CD3EAPO15446 510 aaKnown RBP5.35□□□□□ -1.55
CD44-220ENST00000525688 TRIAP1O43715 76 aa5.35□□□□□ -1.55
CD44-220ENST00000525688 SCAF4O95104 1147 aaKnown RBP5.35□□□□□ -1.55
CD44-220ENST00000525688 CSF1RP07333 972 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms