RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 CYP26A1O43174 497 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 ACO1P21399 889 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 OPRD1P41143 372 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 FNTBP49356 437 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 KIF11P52732 1056 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 PAK1Q13153 545 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 EZH1Q92800 747 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 WBP2Q969T9 261 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 EPC1Q9H2F5 836 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 NMUR1Q9HB89 426 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 RIF1Q5UIP0 2472 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 TLR5O60602 858 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 RNF40O75150 1001 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 YWHAEP62258 255 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 LRMPQ12912 555 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 DHCR24Q15392 516 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 ADGRG2Q8IZP9 1017 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 TRIML1Q8N9V2 468 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 KLF16Q9BXK1 252 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 OSER1Q9NX31 292 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 TBC1D14Q9P2M4 693 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 SMG5Q9UPR3 1016 aaKnown RBP11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 SH3BP1Q9Y3L3 701 aa11.78□□□□□ -0.52
TRAPPC4-204ENST00000524797 OTOGLQ3ZCN5 2332 aa11.77□□□□□ -0.52
TRAPPC4-204ENST00000524797 A0A1W2PQH9 124 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 ATG13O75143 517 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 IRF1P10914 325 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 HOXA6P31267 233 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 HOXC13P31276 330 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 FBXO43Q4G163 708 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 CCDC186Q7Z3E2 898 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 SCD5Q86SK9 330 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 NT5C1BQ96P26 610 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 UBXN6Q9BZV1 441 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 NACA2Q9H009 215 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 CYLDQ9NQC7 956 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 KIAA1468Q9P260 1216 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 USP3Q9Y6I4 520 aa11.77□□□□□ -0.53
TRAPPC4-204ENST00000524797 P4HA2O15460 535 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 GNA14O95837 355 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 RARGP13631 454 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 TBXAS1P24557 533 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 MARSP56192 900 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 CAMK4Q16566 473 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 GOLGA7BQ2TAP0 167 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 RHBDF2Q6PJF5 856 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 WDR5BQ86VZ2 330 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 LONP2Q86WA8 852 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 TTC30AQ86WT1 665 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 TRIM59Q8IWR1 403 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 ANKRD52Q8NB46 1076 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 RUBCNQ92622 972 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 OTUB2Q96DC9 234 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 SRRTQ9BXP5 876 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 RTN4Q9NQC3 1192 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 PTPRZ1P23471 2315 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 MDM4O15151 490 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 TBX18O95935 607 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 ADH1CP00326 375 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 ADH5P11766 374 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 SLC6A11P48066 632 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 SGO2Q562F6 1265 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 RAB41Q5JT25 222 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 HEATR6Q6AI08 1181 aaKnown RBP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 PIGZQ86VD9 579 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 BBS7Q8IWZ6 715 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 ZNF276Q8N554 614 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 DCLK2Q8N568 766 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 RPLP0P6Q8NHW5 317 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 LMO3Q8TAP4 145 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 POLR3BQ9NW08 1133 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 NCDNQ9UBB6 729 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 NAGPAQ9UK23 515 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 SLC8A2Q9UPR5 921 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
TRAPPC4-204ENST00000524797 SPAG17Q6Q759 2223 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 K7EQS6 105 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 HRO43593 1189 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 GREM1O60565 184 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 FGFR1OPO95684 399 aaKnown RBP11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 VDRP11473 427 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 CD19P15391 556 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 PSEN1P49768 467 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 KCNH2Q12809 1159 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 LY6G5CQ5SRR4 150 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 KLHDC10Q6PID8 442 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 HTR3DQ70Z44 454 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 C12orf40Q86WS4 652 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 ARHGEF19Q8IW93 802 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 EHBP1Q8NDI1 1231 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 KAT5Q92993 513 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 HINFPQ9BQA5 517 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 CLSTN2Q9H4D0 955 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 RWDD2AQ9UIY3 292 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 NUDT5Q9UKK9 219 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 TSPAN16Q9UKR8 245 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 PCDHB4Q9Y5E5 795 aa11.75□□□□□ -0.53
TRAPPC4-204ENST00000524797 GVINP1Q7Z2Y8 2422 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms