RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 PDCD11Q14690 1871 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 MBLAC1A4D2B0 266 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 APOL1O14791 398 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 DDNO94850 711 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 TMEM63AO94886 807 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 CD4P01730 458 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ETS1P14921 441 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 EZRP15311 586 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 KCNE1P15382 129 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 GCKP35557 465 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 CLCN3P51790 818 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 NDST1P52848 882 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 GDF10P55107 478 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ZNF200P98182 395 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FASTKD3Q14CZ7 662 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 Q3C1V9 767 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 WASHC2DQ5SRD0 308 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 TTC39BQ5VTQ0 682 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 HHATQ5VTY9 493 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FYB2Q5VWT5 728 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ANKRD22Q5VYY1 191 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 MAP1SQ66K74 1059 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 IQSEC1Q6DN90 963 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 SLC26A11Q86WA9 606 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FBXO16Q8IX29 292 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 PALM2Q8IXS6 379 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 PQLC3Q8N755 202 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FBXO36Q8NEA4 188 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 GPRC5AQ8NFJ5 357 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ACMSDQ8TDX5 336 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 RXFP2Q8WXD0 754 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 STON2Q8WXE9 905 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 PEBP4Q96S96 227 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 KLC2Q9H0B6 622 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ADAMTS10Q9H324 1103 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 XAB2Q9HCS7 855 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 NXF1Q9UBU9 619 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 A0A087WZ62 844 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 SMIM35A0A1B0GVV1 85 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 BIRC5O15392 142 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 XPOTO43592 962 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ALDH1A2O94788 518 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ITGBL1O95965 494 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 TROVE2P10155 538 aaKnown RBP eCLIP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 PDGFRAP16234 1089 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 MARK3P27448 753 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 RPA3P35244 121 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FDFT1P37268 417 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 PLCB3Q01970 1234 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 SEMA5AQ13591 1074 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 SLC1A5Q15758 541 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 DUSP28Q4G0W2 176 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 MSS51Q4VC12 460 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 MARCH8Q5T0T0 291 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FAM102AQ5T9C2 384 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 TRNP1Q6NT89 227 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 TLDC1Q6P9B6 456 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 SLC27A1Q6PCB7 646 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FAM183BPQ6ZVS7 135 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 TRIM50Q86XT4 487 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 REM2Q8IYK8 340 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ANKRD52Q8NB46 1076 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 KLHL29Q96CT2 875 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 HEXIM2Q96MH2 286 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 C7orf26Q96N11 449 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 QKIQ96PU8 341 aaKnown RBP eCLIP5.68□□□□□ -1.54e-7■□□□□ 8.4
CLINT1-208ENST00000524306 LRRC37BQ96QE4 947 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FDXACB1Q9BRP7 624 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 MMADHCQ9H3L0 296 aaPredicted RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ZWILCHQ9H900 591 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 ELP3Q9H9T3 547 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 PCDH18Q9HCL0 1135 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 KLHL11Q9NVR0 708 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 TSPAN16Q9UKR8 245 aa5.68□□□□□ -1.5
CLINT1-208ENST00000524306 MTO1Q9Y2Z2 717 aaKnown RBP5.68□□□□□ -1.5
CLINT1-208ENST00000524306 FAM159BA6NKW6 160 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 GOLGA8SH3BPF8 625 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 PIRO00625 290 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 LMNAP02545 664 aaKnown RBP5.67□□□□□ -1.5
CLINT1-208ENST00000524306 KRT19P08727 400 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 KRT4P19013 534 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 CA4P22748 312 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 PAX3P23760 479 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 SDC4P31431 198 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 GJC1P36383 396 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 RAP1GAPP47736 663 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 SLC8A3P57103 927 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 INHBEP58166 350 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 PRKD1Q15139 912 aaPredicted RBP5.67□□□□□ -1.5
CLINT1-208ENST00000524306 TBCCQ15814 346 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 ZNF394Q53GI3 561 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 ZFYVE27Q5T4F4 411 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 DARS2Q6PI48 645 aaKnown RBP5.67□□□□□ -1.5
CLINT1-208ENST00000524306 SCARA5Q6ZMJ2 495 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 TMEM192Q8IY95 271 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 ENDOVQ8N8Q3 282 aaKnown RBP5.67□□□□□ -1.5
CLINT1-208ENST00000524306 CEP120Q8N960 986 aa5.67□□□□□ -1.5
CLINT1-208ENST00000524306 BEST2Q8NFU1 509 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms