RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 PCDHGA11Q9Y5H2 935 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 MTCH2Q9Y6C9 303 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 LCTP09848 1927 aa8.21□□□□□ -1.1
SPIDR-223ENST00000524033 LCHNA4D1U4 455 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 EPOPA6NHQ4 379 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 A6NHS1 94 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 FOXO6A8MYZ6 492 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 E7ENQ6 273 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 IPO5O00410 1097 aaKnown RBP8.2□□□□□ -1.1
SPIDR-223ENST00000524033 DNALI1O14645 258 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-223ENST00000524033 THAP12O43422 761 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ATP9AO75110 1047 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ATP5HO75947 161 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ARHGEF15O94989 841 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 GJB5O95377 273 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ITGB5P18084 799 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 PTPN7P35236 360 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 GDF10P55107 478 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 GCNT1Q02742 428 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 KYNUQ16719 465 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 IZUMO3Q5VZ72 239 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 FAM117BQ6P1L5 589 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ARHGEF18Q6ZSZ5 1173 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ANKS1BQ7Z6G8 1248 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 CBWD2Q8IUF1 395 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 C4orf19Q8IY42 314 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 KATNAL2Q8IYT4 538 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 SIX5Q8N196 739 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 KIF2BQ8N4N8 673 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.2□□□□□ -1.1
SPIDR-223ENST00000524033 TMEM161BQ8NDZ6 487 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 DBF4BQ8NFT6 615 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 GDAP1Q8TB36 358 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 DYDC1Q8WWB3 177 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 SLC7A6OSQ96CW6 309 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ITPKCQ96DU7 683 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 RAB3IPQ96QF0 476 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-223ENST00000524033 TRIM7Q9C029 511 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 CCDC113Q9H0I3 377 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 MYLK2Q9H1R3 596 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 PPCSQ9HAB8 311 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 RNPEPL1Q9HAU8 725 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 AGO4Q9HCK5 861 aaKnown RBP8.2□□□□□ -1.1
SPIDR-223ENST00000524033 SSU72Q9NP77 194 aaKnown RBP8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ACP6Q9NPH0 428 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 GGT7Q9UJ14 662 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ANAPC7Q9UJX3 599 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 ANAPC5Q9UJX4 755 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 CORO1CQ9ULV4 474 aaPredicted RBP8.2□□□□□ -1.1
SPIDR-223ENST00000524033 TRIM33Q9UPN9 1127 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 CHKBQ9Y259 395 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 INSL6Q9Y581 213 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 USH1CQ9Y6N9 552 aa8.2□□□□□ -1.1
SPIDR-223ENST00000524033 FAM170AA1A519 330 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 FAM47DPA6NHR8 397 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 MAFGO15525 162 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 EDF1O60869 148 aaKnown RBP8.19□□□□□ -1.1
SPIDR-223ENST00000524033 DIAPH2O60879 1101 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 UPP2O95045 317 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 AMHP03971 560 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 T-ENOLP0DO92 83 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PAX7P23759 505 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 HOXC8P31273 242 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 STX2P32856 288 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TAS2R40P59535 323 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PRR20EP86478 221 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PRR20CP86479 221 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PRR20DP86480 221 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PRR20BP86481 221 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PRR20AP86496 221 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 IL9RQ01113 521 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TFF2Q03403 129 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 CYP24A1Q07973 514 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 SF3A3Q12874 501 aaKnown RBP eCLIP8.19□□□□□ -1.1
SPIDR-223ENST00000524033 CBLBQ13191 982 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 SNX1Q13596 522 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 MTMR1Q13613 665 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 ZKSCAN8Q15776 578 aaPredicted RBP8.19□□□□□ -1.1
SPIDR-223ENST00000524033 SNRNP35Q16560 246 aaKnown RBP8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PDK4Q16654 411 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 UGCGQ16739 394 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 AAK1Q2M2I8 961 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PLEKHG4Q58EX7 1191 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 EFHC2Q5JST6 749 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 ANKRD20A2Q5SQ80 823 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 ANKRD20A1Q5TYW2 823 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 ANKRD20A3Q5VUR7 823 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PLEKHA7Q6IQ23 1121 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TRIM72Q6ZMU5 477 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.19□□□□□ -1.1
SPIDR-223ENST00000524033 PPM1KQ8N3J5 372 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 CCDC89Q8N998 374 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 FBXL13Q8NEE6 735 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 ZNF398Q8TD17 642 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 TAS1R2Q8TE23 839 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 FBF1Q8TES7 1133 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 SEPT1Q8WYJ6 367 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 SEPT8Q92599 483 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 KIFAP3Q92845 792 aa8.19□□□□□ -1.1
SPIDR-223ENST00000524033 GPRASP2Q96D09 838 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms