RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, human

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREK1-213	ENST00000523655	SLC4A8	Q2Y0W8	1093 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	SWSAP1	Q6NVH7	229 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	TLDC1	Q6P9B6	456 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	CCDC174	Q6PII3	467 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	ZNF365	Q70YC5	407 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	CLNK	Q7Z7G1	428 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	PPHLN1	Q8NEY8	458 aa	Known RBP	5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	IL17RE	Q8NFR9	667 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	MYCBPAP	Q8TBZ2	947 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	LRTOMT	Q8WZ04	291 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	CCT6B	Q92526	530 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	TBATA	Q96M53	351 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	SMOC2	Q9H3U7	446 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	SLAMF7	Q9NQ25	335 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	INTS13	Q9NVM9	706 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	FRMD4B	Q9Y2L6	1034 aa		5.5	□□□□□ -1.53
SREK1-213	ENST00000523655	LRRIQ1	Q96JM4	1722 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	PRSS29P	A6NIE9	313 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	HSD3B1	P14060	373 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	MAL	P21145	153 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	CHKA	P35790	457 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	PPM1A	P35813	382 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	CASP5	P51878	434 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	GEMIN4	P57678	1058 aa	Known RBP	5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	PROK1	P58294	105 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	RPS7	P62081	194 aa	Known RBP	5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	ZNF844	Q08AG5	666 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	AKNAD1	Q5T1N1	836 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	JAKMIP3	Q5VZ66	844 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	KAZN	Q674X7	775 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	KIAA0895L	Q68EN5	471 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	TAPT1	Q6NXT6	567 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	PHKB	Q93100	1093 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	CGRRF1	Q99675	332 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	C1orf43	Q9BWL3	253 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	BTBD1	Q9H0C5	482 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	CPNE5	Q9HCH3	593 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	AGAP1	Q9UPQ3	857 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	CCDC18	Q5T9S5	1454 aa		5.49	□□□□□ -1.53
SREK1-213	ENST00000523655	CCDC141	Q6ZP82	1450 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	MET	P08581	1390 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	CCDC195	A0A1B0GUA6	201 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	EXOC5	O00471	708 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	SGTA	O43765	313 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	MGEA5	O60502	916 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	RBMXL2	O75526	392 aa	Known RBP	5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	RHO	P08100	348 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	CHRM3	P20309	590 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	TNFSF4	P23510	183 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	POLD3	Q15054	466 aa	Predicted RBP	5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	PREPL	Q4J6C6	727 aa	Predicted RBP	5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	TSTD2	Q5T7W7	516 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	IZUMO3	Q5VZ72	239 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	MZT2A	Q6P582	158 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	NSUN6	Q8TEA1	469 aa	Known RBP	5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	SKA1	Q96BD8	255 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	GPR52	Q9Y2T5	361 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	PCDHA3	Q9Y5H8	950 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	NALCN	Q8IZF0	1738 aa		5.48	□□□□□ -1.53
SREK1-213	ENST00000523655	ZNF785	A8K8V0	405 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	RHPN2P1	A8MT19	583 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	NT5C1B-RDH14	C9J2C7	533 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	FRS3	O43559	492 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	VPS4B	O75351	444 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	ABCB4	P21439	1286 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	ANXA11	P50995	505 aa	Known RBP	5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	SET	Q01105	290 aa	Predicted RBP	5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	RAB39A	Q14964	217 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	CCDC93	Q567U6	631 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	HYI	Q5T013	277 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	MAEA	Q7L5Y9	396 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	TMPRSS9	Q7Z410	1059 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	AMIGO2	Q86SJ2	522 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	DAAM2	Q86T65	1068 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	SNX19	Q92543	992 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	KIAA1191	Q96A73	305 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	GCC1	Q96CN9	775 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	APIP	Q96GX9	242 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	TRIB1	Q96RU8	372 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	MYLK2	Q9H1R3	596 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	CERS4	Q9HA82	394 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	SLC17A6	Q9P2U8	582 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	ARPP21	Q9UBL0	812 aa	Predicted RBP	5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	CDC23	Q9UJX2	597 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	PADI4	Q9UM07	663 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	NRAP	Q86VF7	1730 aa		5.47	□□□□□ -1.53
SREK1-213	ENST00000523655	TNRC18	O15417	2968 aa	Predicted RBP	5.46	□□□□□ -1.53
SREK1-213	ENST00000523655	KAT6B	Q8WYB5	2073 aa		5.46	□□□□□ -1.53
SREK1-213	ENST00000523655	XRN1	Q8IZH2	1706 aa	Known RBP	5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	ARHGEF28	Q8N1W1	1705 aa	Known RBP	5.46	□□□□□ -1.54
SREK1-213	ENST00000523655		A0A087WV62	115 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	LINC00473	A8K010	186 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	KPNA5	O15131	536 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	AGR2	O95994	175 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	C1R	P00736	705 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	GJB1	P08034	283 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	MYF5	P13349	255 aa		5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	RPL17	P18621	184 aa	Known RBP	5.46	□□□□□ -1.54
SREK1-213	ENST00000523655	GPSM2	P81274	684 aa		5.46	□□□□□ -1.54

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms