RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 CNGA2Q16280 664 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 FSCBQ5H9T9 825 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 ERMARDQ5T6L9 678 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 ELMO2Q96JJ3 720 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 FRMD8Q9BZ67 464 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 FRMD8P1Q9BZ68 369 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 TASP1Q9H6P5 420 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 EPS15L1Q9UBC2 864 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 SLC39A10Q9ULF5 831 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 NVLO15381 856 aaKnown RBP13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 TGM2P21980 687 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 FDFT1P37268 417 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 NOMO3P69849 1222 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 ULBP1Q9BZM6 244 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 NXF3Q9H4D5 531 aaKnown RBP13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 PPCSQ9HAB8 311 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 PCDH9Q9HC56 1237 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 CPSF2Q9P2I0 782 aaKnown RBP13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 HOXA2O43364 376 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 PPFIA2O75334 1257 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 CKMP06732 381 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 SP3Q02447 781 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZSWIM2Q8NEG5 633 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 PPTC7Q8NI37 304 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 CAVIN3Q969G5 261 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 RNF208Q9H0X6 261 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 SUN2Q9UH99 717 aa13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 USP15Q9Y4E8 981 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.55□□□□□ -0.24
PCDHGB1-201ENST00000523390 KCNK1O00180 336 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 RIBC1Q8N443 379 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 C12orf29Q8N999 325 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 FAM96AQ9H5X1 160 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 ECT2Q9H8V3 914 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 TRPM3Q9HCF6 1732 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 CES2O00748 559 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 ERFP50548 548 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 TTC30AQ86WT1 665 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 ARMC2Q8NEN0 867 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 C7orf43Q8WVR3 580 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 LENG1Q96BZ8 264 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 RMDN2Q96LZ7 410 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 PCDHB18PQ96TA0 734 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 TBCBQ99426 244 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 TMBIM4Q9HC24 238 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 RBPJLQ9UBG7 517 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 SLC30A1Q9Y6M5 507 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 LOC102724159A0A0B4J2E5 919 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 F8W8V4 182 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 MEFVO15553 781 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 OPHN1O60890 802 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 NDUFS3O75489 264 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 CYP1A2P05177 515 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 ZSCAN5DPP0CG00 497 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 SLC11A2P49281 568 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 RPL10AP62906 217 aaKnown RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 MRPS6P82932 125 aaKnown RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 PWP2Q15269 919 aaKnown RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 SEC16BQ96JE7 1060 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 FAM111AQ96PZ2 611 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 PIH1D1Q9NWS0 290 aaKnown RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 H7C4K7 107 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 MAP2K7O14733 419 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 USP17L7P0C7H9 530 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 PECAM1P16284 738 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 ICAM3P32942 547 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 CORO7P57737 925 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 SPIRE1Q08AE8 756 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 PALB2Q86YC2 1186 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 DAW1Q8N136 415 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 SGF29Q96ES7 293 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 SMARCD1Q96GM5 515 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 YME1L1Q96TA2 773 aa13.54□□□□□ -0.24
PCDHGB1-201ENST00000523390 A0A0G2JLL6 359 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 ANXA9O76027 345 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 ENDOD1O94919 500 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 TTC39BQ5VTQ0 682 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 SPRYD7Q5W111 196 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 TMC3Q7Z5M5 1100 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 PRRT2Q7Z6L0 340 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 TSEN2Q8NCE0 465 aaKnown RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 SPDYE1Q8NFV5 336 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 DMAP1Q9NPF5 467 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 ST3GAL5Q9UNP4 418 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 CNTNAP1P78357 1384 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 DNAJC6O75061 913 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 CST3P01034 146 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 PTPN1P18031 435 aaKnown RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 CD52P31358 61 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 BLOC1S5Q8TDH9 187 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 ALG3Q92685 438 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 C2CD2Q9Y426 696 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 MAFBQ9Y5Q3 323 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 UMODL1Q5DID0 1318 aa13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-201ENST00000523390 F5H5T6 163 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms