RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 PAPSS1O43252 624 aaPredicted RBP15.43■□□□□ 0.06
CHMP7-210ENST00000523091 AVILO75366 819 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 STAU1O95793 577 aaKnown RBP15.43■□□□□ 0.06
CHMP7-210ENST00000523091 SMIM10L2AP0DMW4 78 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 SMIM10L2BP0DMW5 78 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 TAC1P20366 129 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 RPA3P35244 121 aaPredicted RBP15.43■□□□□ 0.06
CHMP7-210ENST00000523091 GCKP35557 465 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 ATP5OP48047 213 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 ZNF200P98182 395 aaPredicted RBP15.43■□□□□ 0.06
CHMP7-210ENST00000523091 ROR1Q01973 937 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 SOWAHAQ2M3V2 549 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 ZNF618Q5T7W0 954 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 SLC27A1Q6PCB7 646 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 SESTD1Q86VW0 696 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 RIBC1Q8N443 379 aaPredicted RBP15.43■□□□□ 0.06
CHMP7-210ENST00000523091 CCDC33Q8N5R6 958 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 TMEM40Q8WWA1 233 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 ABHD16BQ9H3Z7 469 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 RECQL4O94761 1208 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 CCDC130P13994 396 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 LMO2P25791 158 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 NOMO1Q15155 1222 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 ZBTB6Q15916 424 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 ACCSLQ4AC99 568 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 TDRPQ86YL5 185 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 SLC35F5Q8WV83 523 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 MAGEB18Q96M61 343 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 RNF157Q96PX1 679 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 FRMD8P1Q9BZ68 369 aaPredicted RBP15.43■□□□□ 0.06
CHMP7-210ENST00000523091 GCOM2Q9BZD3 368 aaPredicted RBP15.43■□□□□ 0.06
CHMP7-210ENST00000523091 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 GOLGA2P5Q9HBQ8 144 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.43■□□□□ 0.061e-5■■□□□ 14.4
CHMP7-210ENST00000523091 KIAA1257Q9ULG3 409 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 CHMP2BQ9UQN3 213 aa15.43■□□□□ 0.06
CHMP7-210ENST00000523091 HOXD8P13378 290 aaPredicted RBP15.42■□□□□ 0.06
CHMP7-210ENST00000523091 ADORA2BP29275 332 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 DCAF4L1Q3SXM0 396 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 PPP6R3Q5H9R7 873 aaPredicted RBP15.42■□□□□ 0.06
CHMP7-210ENST00000523091 FAXCQ5TGI0 409 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 PLEKHH3Q7Z736 793 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 PLD5Q8N7P1 536 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.42■□□□□ 0.06
CHMP7-210ENST00000523091 DNAJB3Q8WWF6 145 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 BATF3Q9NR55 127 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 SPATS2LQ9NUQ6 558 aaKnown RBP15.42■□□□□ 0.06
CHMP7-210ENST00000523091 ZMYND8Q9ULU4 1186 aaPredicted RBP15.42■□□□□ 0.06
CHMP7-210ENST00000523091 A8MXQ7 604 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 ASMTLO95671 621 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 FGFR1P11362 822 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 CYP2C9P11712 490 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 GEMIN4P57678 1058 aaKnown RBP15.42■□□□□ 0.06
CHMP7-210ENST00000523091 SLC6A3Q01959 620 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 SLC1A5Q15758 541 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 C9orf57Q5W0N0 161 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 SPATA21Q7Z572 469 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 NT5DC4Q86YG4 428 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 PALM2Q8IXS6 379 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 PQLC3Q8N755 202 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 SNRNP25Q9BV90 132 aaKnown RBP15.42■□□□□ 0.06
CHMP7-210ENST00000523091 SLC4A5Q9BY07 1137 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 C12orf65Q9H3J6 166 aaKnown RBP15.42■□□□□ 0.06
CHMP7-210ENST00000523091 DOCK3Q8IZD9 2030 aa15.42■□□□□ 0.06
CHMP7-210ENST00000523091 SPTLC1O15269 473 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 UBOX5O94941 541 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 DNAJC3Q13217 504 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 EFHC2Q5JST6 749 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 IQSEC1Q6DN90 963 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 PPP1R21Q6ZMI0 780 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 TMEM110Q86TL2 294 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 ATP11CQ8NB49 1132 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 PCDH19Q8TAB3 1148 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 DENND1AQ8TEH3 1009 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 SMC6Q96SB8 1091 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 KLF6Q99612 283 aaPredicted RBP15.41■□□□□ 0.06
CHMP7-210ENST00000523091 USP29Q9HBJ7 922 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 PCDH18Q9HCL0 1135 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 PSMC3IPQ9P2W1 217 aaPredicted RBP15.41■□□□□ 0.06
CHMP7-210ENST00000523091 ANKRD33BA6NCL7 494 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 GOLGA8RI6L899 631 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 KCNN4O15554 427 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 DNAJC8O75937 253 aaPredicted RBP15.41■□□□□ 0.06
CHMP7-210ENST00000523091 ATP6V1G2O95670 118 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 GHRP10912 638 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 KRT4P19013 534 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 CA4P22748 312 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 RBL1P28749 1068 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 SDC4P31431 198 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 ELK3P41970 407 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 HDAC4P56524 1084 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 IL9RQ01113 521 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 ANKRD23Q86SG2 305 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 AGGF1Q8N302 714 aaeCLIP15.41■□□□□ 0.06
CHMP7-210ENST00000523091 SPDL1Q96EA4 605 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 RMDN2Q96LZ7 410 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 PAFAH2Q99487 392 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 EBF2Q9HAK2 575 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 PLEKHA5Q9HAU0 1116 aa15.41■□□□□ 0.06
CHMP7-210ENST00000523091 NOD2Q9HC29 1040 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms