RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NAV2Q8IVL1 2488 aa7.03□□□□□ -1.28
VPS13B-211ENST00000522802 HIP1O00291 1037 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 PAPSS2O95340 614 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-211ENST00000522802 FOSP01100 380 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-211ENST00000522802 ZNF806P0C7X5 589 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 CALM1P0DP23 149 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 CALM2P0DP24 149 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 CALM3P0DP25 149 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 CCNE1P24864 410 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 PXNP49023 591 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-211ENST00000522802 GNAQP50148 359 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 SETQ01105 290 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-211ENST00000522802 CREMQ03060 361 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 SOWAHCQ53LP3 525 aaPredicted RBP7.02□□□□□ -1.29
VPS13B-211ENST00000522802 FAM78AQ5JUQ0 283 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 PLA2G4FQ68DD2 849 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 KBTBD6Q86V97 674 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 MICU3Q86XE3 530 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 SPEM1Q8N4L4 309 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 GSTCDQ8NEC7 633 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 ELSPBP1Q96BH3 223 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 EDEM2Q9BV94 578 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 SCNM1Q9BWG6 230 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 UNC45AQ9H3U1 944 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 NXF3Q9H4D5 531 aaKnown RBP7.02□□□□□ -1.29
VPS13B-211ENST00000522802 BRD9Q9H8M2 597 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 SP110Q9HB58 689 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 TBC1D22BQ9NU19 505 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 AP5S1Q9NUS5 200 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 ADAM28Q9UKQ2 775 aa7.02□□□□□ -1.29
VPS13B-211ENST00000522802 MRPS23Q9Y3D9 190 aaKnown RBP7.02□□□□□ -1.29
VPS13B-211ENST00000522802 SF3B1O75533 1304 aaKnown RBP eCLIP7.01□□□□□ -1.298e-6■■■■■ 82.4
VPS13B-211ENST00000522802 FAM221BA6H8Z2 402 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 SMCO2A6NFE2 343 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 CCDC69A6NI79 296 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 CYSRT1A8MQ03 144 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 ARNTLO00327 626 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 MAN2B1O00754 1011 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 AURKAO14965 403 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 TSPAN1O60635 241 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 KCNH1O95259 989 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 CD3EP07766 207 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 RHOP08100 348 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 CYP3A4P08684 503 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 POU2F2P09086 479 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 GSTM1P09488 218 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 IFNGR1P15260 489 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 CNR2P34972 360 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 MPLP40238 635 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 RAP1GAPP47736 663 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 AMPD2Q01433 879 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 PSMD5Q16401 504 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 VITQ6UXI7 678 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 ATG4DQ86TL0 474 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-211ENST00000522802 WDR5BQ86VZ2 330 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 ZNF227Q86WZ6 799 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 TMEM52Q8NDY8 209 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 PDZD8Q8NEN9 1154 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 LNX1Q8TBB1 728 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-211ENST00000522802 PPP1R14AQ96A00 147 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 TCEAL4Q96EI5 215 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 SGSM3Q96HU1 749 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 FCRL2Q96LA5 508 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-211ENST00000522802 COLEC11Q9BWP8 271 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 CDADC1Q9BWV3 514 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 LRRC2Q9BYS8 371 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 INO80BQ9C086 356 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-211ENST00000522802 OSBPL2Q9H1P3 480 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 ZNF334Q9HCZ1 680 aaPredicted RBP7.01□□□□□ -1.29
VPS13B-211ENST00000522802 NRBP2Q9NSY0 501 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 ERVK13-1Q9NX77 482 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 COL4A3BPQ9Y5P4 624 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 CACNA1EQ15878 2313 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 NUP205Q92621 2012 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 KIAA1549LQ6ZVL6 1849 aa7.01□□□□□ -1.29
VPS13B-211ENST00000522802 CFAP46Q8IYW2 2715 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 A0A1W2PQU0 124 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 LNP1A1A4G5 178 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 CASTOR2A6NHX0 329 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 SLC38A8A6NNN8 435 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 MSH4O15457 936 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 TBX1O43435 398 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 EDIL3O43854 480 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 EXTL3O43909 919 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 MAFO75444 373 aaPredicted RBP7□□□□□ -1.29
VPS13B-211ENST00000522802 RPP40O75818 363 aaKnown RBP7□□□□□ -1.29
VPS13B-211ENST00000522802 HPXP02790 462 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 SRGAP2CP0DJJ0 459 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 AKAP5P24588 427 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
VPS13B-211ENST00000522802 GDI1P31150 447 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 VIPR2P41587 438 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 CCR2P41597 374 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 DNM2P50570 870 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 HK2P52789 917 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 DUSP4Q13115 394 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 HDAC1Q13547 482 aaPredicted RBP7□□□□□ -1.29
VPS13B-211ENST00000522802 HSP90AA2PQ14568 343 aaPredicted RBP7□□□□□ -1.29
VPS13B-211ENST00000522802 NR0B2Q15466 257 aa7□□□□□ -1.29
VPS13B-211ENST00000522802 DPY19L1Q2PZI1 675 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms