RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 GALR2O43603 387 aaPredicted RBP18.81■□□□□ 0.6
CLK4-211ENST00000522556 TLR5O60602 858 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 IRF1P10914 325 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 TCF3P15923 654 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 KLK7P49862 253 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 TKTL1P51854 596 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 ADIGQ0VDE8 80 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 BST2Q10589 180 aaKnown RBP18.81■□□□□ 0.6
CLK4-211ENST00000522556 RUNX3Q13761 415 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 KRT31Q15323 416 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 CT47A1Q5JQC4 288 aaPredicted RBP18.81■□□□□ 0.6
CLK4-211ENST00000522556 LCLAT1Q6UWP7 414 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 ZNF852Q6ZMS4 543 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 CCDC186Q7Z3E2 898 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 DTWD2Q8NBA8 298 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 OSCP1Q8WVF1 389 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 SECISBP2LQ93073 1101 aaKnown RBP18.81■□□□□ 0.6
CLK4-211ENST00000522556 PHOX2BQ99453 314 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 ULBP1Q9BZM6 244 aa18.81■□□□□ 0.6
CLK4-211ENST00000522556 TLR8Q9NR97 1041 aaKnown RBP18.81■□□□□ 0.6
CLK4-211ENST00000522556 RBM12Q9NTZ6 932 aaKnown RBP18.81■□□□□ 0.6
CLK4-211ENST00000522556 THG1LQ9NWX6 298 aaKnown RBP18.81■□□□□ 0.6
CLK4-211ENST00000522556 DUS2Q9NX74 493 aaKnown RBP18.81■□□□□ 0.6
CLK4-211ENST00000522556 PES1O00541 588 aaKnown RBP18.8■□□□□ 0.6
CLK4-211ENST00000522556 PFKLP17858 780 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 TUBP50607 506 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 PLCB2Q00722 1185 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 PON2Q15165 354 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 GAB4Q2WGN9 574 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 ITPRIPL2Q3MIP1 535 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 ANO6Q4KMQ2 910 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 PMF1Q6P1K2 205 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 CC2D1AQ6P1N0 951 aaPredicted RBP18.8■□□□□ 0.6
CLK4-211ENST00000522556 DENND1BQ6P3S1 775 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 AOPEPQ8N6M6 819 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 SHC3Q92529 594 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 DNAI2Q9GZS0 605 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 VPS16Q9H269 839 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 CYLDQ9NQC7 956 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLK4-211ENST00000522556 HESX1Q9UBX0 185 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 NAGPAQ9UK23 515 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 FHOD1Q9Y613 1164 aa18.8■□□□□ 0.6
CLK4-211ENST00000522556 RARGP13631 454 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 EEF1GP26641 437 aaKnown RBP18.79■□□□□ 0.6
CLK4-211ENST00000522556 PLA2G4AP47712 749 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 IFNAR2P48551 515 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 PDE6CP51160 858 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 MYL5Q02045 173 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 CLEC4CQ8WTT0 213 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 SLC35F5Q8WV83 523 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 FUCA2Q9BTY2 467 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 LSM14BQ9BX40 385 aaKnown RBP18.79■□□□□ 0.6
CLK4-211ENST00000522556 ECT2Q9H8V3 914 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 FBRSL1Q9HCM7 1045 aaKnown RBP18.79■□□□□ 0.6
CLK4-211ENST00000522556 DNAJC12Q9UKB3 198 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 KIAA1549LQ6ZVL6 1849 aa18.79■□□□□ 0.6
CLK4-211ENST00000522556 CACNA1IQ9P0X4 2223 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 ANTXRLA6NF34 631 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 GREM1O60565 184 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 LETM1O95202 739 aaPredicted RBP18.78■□□□□ 0.6
CLK4-211ENST00000522556 SETSIPP0DME0 302 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 LCP1P13796 627 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 HOXC13P31276 330 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 USP8P40818 1118 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 MFAP3P55082 362 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 NHLH1Q02575 133 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 GAS6Q14393 721 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 CNGA2Q16280 664 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 Q6ZS52 159 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 APTXQ7Z2E3 356 aaKnown RBP18.78■□□□□ 0.6
CLK4-211ENST00000522556 CLDN23Q96B33 292 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 KLF16Q9BXK1 252 aaPredicted RBP18.78■□□□□ 0.6
CLK4-211ENST00000522556 CYTH4Q9UIA0 394 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 ATG2BQ96BY7 2078 aa18.78■□□□□ 0.6
CLK4-211ENST00000522556 FAM170AA1A519 330 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 MAN2B1O00754 1011 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 EPHB6O15197 1021 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 CYP17A1P05093 508 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 CHRNB1P11230 501 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 ATP1A3P13637 1013 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 ZNF18P17022 549 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 GJA4P35212 333 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 PDGFRLQ15198 375 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 ANGPT1Q15389 498 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 C10orf120Q5SQS8 335 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 RALGPS2Q86X27 583 aaPredicted RBP18.77■□□□□ 0.6
CLK4-211ENST00000522556 BBS7Q8IWZ6 715 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 MAML2Q8IZL2 1156 aaPredicted RBP18.77■□□□□ 0.6
CLK4-211ENST00000522556 EZH1Q92800 747 aaPredicted RBP18.77■□□□□ 0.6
CLK4-211ENST00000522556 OSBPL6Q9BZF3 934 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 UBXN6Q9BZV1 441 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 NACA2Q9H009 215 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 C8orf33Q9H7E9 229 aaPredicted RBP18.77■□□□□ 0.6
CLK4-211ENST00000522556 LRRC4Q9HBW1 653 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 TJP2Q9UDY2 1190 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 KIAA1257Q9ULG3 409 aa18.77■□□□□ 0.6
CLK4-211ENST00000522556 SYCE3A1L190 88 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 YJEFN3A6XGL0 299 aa18.76■□□□□ 0.59
CLK4-211ENST00000522556 E7ENQ6 273 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 248.8 ms