RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 STX7O15400 261 aaKnown RBP16.75■□□□□ 0.27
USP42-207ENST00000521713 CARSP49589 748 aaKnown RBP16.75■□□□□ 0.27
USP42-207ENST00000521713 EFEMP1Q12805 493 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 SZRD1Q7Z422 152 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 ZDHHC17Q8IUH5 632 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 HERC6Q8IVU3 1022 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 ABRAQ8N0Z2 381 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 NPHS2Q9NP85 383 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 PCDHGB4Q9UN71 923 aa16.75■□□□□ 0.27
USP42-207ENST00000521713 PDE5AO76074 875 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 TKTL1P51854 596 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 C1QBPQ07021 282 aaKnown RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 MTFR1Q15390 333 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 ZCWPW2Q504Y3 356 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 ADCK1Q86TW2 530 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 PPIL6Q8IXY8 311 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 DDHD1Q8NEL9 900 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 SLC7A5P2Q9GIP4 190 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 BLOC1S4Q9NUP1 217 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 ITGB1BP2Q9UKP3 347 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 EIF4BP23588 611 aaKnown RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 FAM110CQ1W6H9 321 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 MOB2Q70IA6 237 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 UNC45BQ8IWX7 931 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 SLC25A41Q8N5S1 370 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 CCT7Q99832 543 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 ADAM2Q99965 735 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 MAF1Q9H063 256 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 C20orf96Q9NUD7 363 aaPredicted RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 AP4S1Q9Y587 144 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 CCDC195A0A1B0GUA6 201 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 HSPA1AP0DMV8 641 aaKnown RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 HSPA1BP0DMV9 641 aaKnown RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 SERPINB1P30740 379 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 SMAD1Q15797 465 aaKnown RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 FAM171A1Q5VUB5 890 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 ANKRD23Q86SG2 305 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 PRUNE1Q86TP1 453 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 ZBTB10Q96DT7 871 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 PNKPQ96T60 521 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 MROH7Q68CQ1 1323 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 CDH2P19022 906 aaPredicted RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 TUFMP49411 452 aaKnown RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 SLC12A3P55017 1021 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 LRRC8EQ6NSJ5 796 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 C9orf72Q96LT7 481 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 TEX12Q9BXU0 123 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.74■□□□□ 0.27
USP42-207ENST00000521713 LZTS1Q9Y250 596 aa16.74■□□□□ 0.27
USP42-207ENST00000521713 KCNA2P16389 499 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 S100A5P33763 92 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 RAP1GAPP47736 663 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 ABCE1P61221 599 aaKnown RBP16.73■□□□□ 0.27
USP42-207ENST00000521713 STX3Q13277 289 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 SENP6Q9GZR1 1112 aaPredicted RBP16.73■□□□□ 0.27
USP42-207ENST00000521713 ELOVL4Q9GZR5 314 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 AAR2Q9Y312 384 aaKnown RBP16.73■□□□□ 0.27
USP42-207ENST00000521713 RRM1P23921 792 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 COILP38432 576 aaPredicted RBP16.73■□□□□ 0.27
USP42-207ENST00000521713 OXCT1P55809 520 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 TMEM86AQ8N2M4 240 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 FAM71DQ8N9W8 422 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 GGT7Q9UJ14 662 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 PAEPP09466 180 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 PAX3P23760 479 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 DNAJB2P25686 324 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 NDST1P52848 882 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 RBBP7Q16576 425 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 UBXN6Q9BZV1 441 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 TSR3Q9UJK0 312 aaKnown RBP16.73■□□□□ 0.27
USP42-207ENST00000521713 LACTBL1A8MY62 500 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 B2RBV5 119 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 SPATA31C2B4DYI2 1134 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 RNASEH1O60930 286 aaKnown RBP16.73■□□□□ 0.27
USP42-207ENST00000521713 SUPT3HO75486 399 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 PROSCO94903 275 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 FGRP09769 529 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 RAP1GDS1P52306 607 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 TFDP3Q5H9I0 405 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 C1orf186Q6ZWK4 172 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 CCNJLQ8IV13 435 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 ZNF555Q8NEP9 628 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 SMARCD1Q96GM5 515 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 SLC25A13Q9UJS0 675 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 CHMP2BQ9UQN3 213 aa16.73■□□□□ 0.27
USP42-207ENST00000521713 A0A0A6YYK5 440 aaPredicted RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 HMOX2P30519 316 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 HSD17B3P37058 310 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 ALDH18A1P54886 795 aaKnown RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 KIF2BQ8N4N8 673 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 MTMR14Q8NCE2 650 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 CHST12Q9NRB3 414 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 ZBTB48P10074 688 aaPredicted RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 KLRC2P26717 231 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 KRR1Q13601 381 aaKnown RBP16.72■□□□□ 0.27
USP42-207ENST00000521713 NT5DC1Q5TFE4 455 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 DDIASQ8IXT1 998 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 RXFP2Q8WXD0 754 aa16.72■□□□□ 0.27
USP42-207ENST00000521713 CAVIN3Q969G5 261 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms