RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 RWDD4Q6NW29 188 aaKnown RBP11.83□□□□□ -0.52
CLK4-206ENST00000520878 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 TTC17Q96AE7 1141 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 NFKBIZQ9BYH8 718 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 EPB41L4BQ9H329 900 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 PLEKHA5Q9HAU0 1116 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 ST3GAL5Q9UNP4 418 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 SUN1O94901 812 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 THP07101 528 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 NCAM1P13591 858 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 KRT4P19013 534 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 IVDP26440 423 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 ELK3P41970 407 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 MAGEA9P43362 315 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 RNASELQ05823 741 aaKnown RBP11.83□□□□□ -0.52
CLK4-206ENST00000520878 DEUP1Q05D60 604 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 CACNB2Q08289 660 aaPredicted RBP11.83□□□□□ -0.52
CLK4-206ENST00000520878 DPYSL3Q14195 570 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 POLNQ7Z5Q5 900 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 NT5DC4Q86YG4 428 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 ARFGAP1Q8N6T3 406 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 SLC13A1Q9BZW2 595 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 KRT82Q9NSB4 513 aa11.83□□□□□ -0.52
CLK4-206ENST00000520878 CCDC78A2IDD5 438 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 C2CD4BA6NLJ0 364 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 TFE3P19532 575 aaPredicted RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 CYP3A5P20815 502 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 TKTL1P51854 596 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 SLC25A11Q02978 314 aaKnown RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 EFTUD2Q15029 972 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLK4-206ENST00000520878 CCDC14Q49A88 953 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 HIBCHQ6NVY1 386 aaPredicted RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 MAMDC4Q6UXC1 1216 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 VPS52Q8N1B4 723 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 RNF157Q96PX1 679 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 PEBP4Q96S96 227 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 DRG1Q9Y295 367 aaKnown RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 STK38LQ9Y2H1 464 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 ITGAVP06756 1048 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 FAM200BP0CF97 657 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 SRGAP2BP0DMP2 458 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 STIP1P31948 543 aaKnown RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 NDUFV1P49821 464 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 RGMBQ6NW40 437 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 ZNF467Q7Z7K2 595 aaPredicted RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 SPATS2Q86XZ4 545 aaKnown RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 UBR7Q8N806 425 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 DNAAF3Q8N9W5 541 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 KAT2BQ92831 832 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 TLCD1Q96CP7 247 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 MCRS1Q96EZ8 462 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 SENP8Q96LD8 212 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 STAP1Q9ULZ2 295 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 TCRBV7S3A2A0A539 114 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 FAM47DPA6NHR8 397 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 NDC80O14777 642 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 SPTLC1O15269 473 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 F2P00734 622 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 SAT1P21673 171 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 PNPLA4P41247 253 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 FLT3LGP49771 235 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 ERMARDQ5T6L9 678 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 PID1Q7Z2X4 250 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 CTU1Q7Z7A3 348 aaKnown RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 METTL23Q86XA0 190 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 CEP57Q86XR8 500 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 PYROXD2Q8N2H3 581 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 ADAMTS10Q9H324 1103 aa11.82□□□□□ -0.52
CLK4-206ENST00000520878 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.82□□□□□ -0.52
CLK4-206ENST00000520878 ZC3H7BQ9UGR2 993 aaKnown RBP11.82□□□□□ -0.52
CLK4-206ENST00000520878 MOCS2O96007 188 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 MMP13P45452 471 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 LILRA4P59901 499 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 GBE1Q04446 702 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 SPARCL1Q14515 664 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 ANKRD20A8PQ5CZ79 823 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 ANKRD52Q8NB46 1076 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 B3GALNT2Q8NCR0 500 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 TBCBQ99426 244 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 KLHL8Q9P2G9 620 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 DCTN4Q9UJW0 460 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 FGFR1P11362 822 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 ELNP15502 786 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 PTPN1P18031 435 aaKnown RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 KLRC2P26717 231 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 CRYBB1P53674 252 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 SOX4Q06945 474 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 SETDB1Q15047 1291 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 EFHC1Q5JVL4 640 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 FNBP1LQ5T0N5 605 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 KCNT2Q6UVM3 1135 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 CPT1BQ92523 772 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 C12orf65Q9H3J6 166 aaKnown RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 DDIT4Q9NX09 232 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 NUDT5Q9UKK9 219 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 SHOC2Q9UQ13 582 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 PRG3Q9Y2Y8 225 aaPredicted RBP11.81□□□□□ -0.52
CLK4-206ENST00000520878 MYADML2A6NDP7 307 aa11.81□□□□□ -0.52
CLK4-206ENST00000520878 GOT1P17174 413 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms