RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 CRY1Q16526 586 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 TCEAL6Q6IPX3 200 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 C11orf74Q86VG3 221 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 UNC93AQ86WB7 457 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 RASSF3Q86WH2 238 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 CRYBG2Q8N1P7 616 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 ALLCQ8N6M5 410 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 TXNDC5Q8NBS9 432 aaKnown RBP16.06■□□□□ 0.16
CSMD1-207ENST00000520451 MDGA1Q8NFP4 955 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 TCEAL3Q969E4 200 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 CCDC47Q96A33 483 aaKnown RBP16.06■□□□□ 0.16
CSMD1-207ENST00000520451 OTUB2Q96DC9 234 aa16.06■□□□□ 0.16
CSMD1-207ENST00000520451 CNOT6LQ96LI5 555 aaKnown RBP16.06■□□□□ 0.16
CSMD1-207ENST00000520451 EPG5Q9HCE0 2579 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 FAM92AA1XBS5 289 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 BCLAF3A2AJT9 711 aaKnown RBP16.05■□□□□ 0.16
CSMD1-207ENST00000520451 BEST1O76090 585 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 ALDH1A2O94788 518 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 KIF20AO95235 890 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 CAVIN2O95810 425 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 PRR29P0C7W0 189 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 FAM200BP0CF97 657 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 IRF1P10914 325 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 HNRNPLP14866 589 aaKnown RBP eCLIP16.05■□□□□ 0.162e-7■■■■□ 19.3
CSMD1-207ENST00000520451 TRIM21P19474 475 aaKnown RBP16.05■□□□□ 0.16
CSMD1-207ENST00000520451 ADORA2BP29275 332 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 SYKP43405 635 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 VAMP7P51809 220 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 GAD2Q05329 585 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 C1orf220Q5T0J3 134 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 BTBD8Q5XKL5 378 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 PMS2CLQ68D20 193 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 TMEM92Q6UXU6 159 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 BBS7Q8IWZ6 715 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 C12orf29Q8N999 325 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 IL17RCQ8NAC3 791 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 FBXO44Q9H4M3 255 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 CSNK1G1Q9HCP0 422 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 TRAF3IP3Q9Y228 551 aa16.05■□□□□ 0.16
CSMD1-207ENST00000520451 CNOT1A5YKK6 2376 aaKnown RBP16.05■□□□□ 0.16
CSMD1-207ENST00000520451 SGK1O00141 431 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 HOXC11O43248 304 aaPredicted RBP16.04■□□□□ 0.16
CSMD1-207ENST00000520451 TLR5O60602 858 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 TRIM49P0CI25 452 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 TRIM49CP0CI26 452 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 CHRM1P11229 460 aaPredicted RBP16.04■□□□□ 0.16
CSMD1-207ENST00000520451 BCKDHBP21953 392 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 NR2F2P24468 414 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 TNFRSF4P43489 277 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 GCLMP48507 274 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 PGFP49763 221 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 NDUFA8P51970 172 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 HSF5Q4G112 596 aaPredicted RBP16.04■□□□□ 0.16
CSMD1-207ENST00000520451 EOGTQ5NDL2 527 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 EMC10Q5UCC4 262 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 RNF43Q68DV7 783 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 NAT16Q8N8M0 369 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 WBP2Q969T9 261 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 JAKMIP2Q96AA8 810 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 EDEM2Q9BV94 578 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 IMPG2Q9BZV3 1241 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 ZDHHC4Q9NPG8 344 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 TLR8Q9NR97 1041 aaKnown RBP16.04■□□□□ 0.16
CSMD1-207ENST00000520451 CIZ1Q9ULV3 898 aaPredicted RBP16.04■□□□□ 0.16
CSMD1-207ENST00000520451 MAPK8IP1Q9UQF2 711 aa16.04■□□□□ 0.16
CSMD1-207ENST00000520451 A0A0A0MRY4 1105 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 TBC1D3BA6NDS4 549 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 TM4SF5O14894 197 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 MAPK13O15264 365 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 RHOBTB3O94955 611 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 KRT13P13646 458 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 KIR2DL1P43626 348 aaPredicted RBP16.03■□□□□ 0.16
CSMD1-207ENST00000520451 INCA1Q0VD86 236 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 ANO4Q32M45 955 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 INTS8Q75QN2 995 aaKnown RBP16.03■□□□□ 0.16
CSMD1-207ENST00000520451 GPRIN1Q7Z2K8 1008 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 CYP2U1Q7Z449 544 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 ETFBKMTQ8IXQ9 262 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 FAM186BQ8IYM0 893 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 PHTF2Q8N3S3 785 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 WHAMMQ8TF30 809 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 TWNKQ96RR1 684 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 DUSP9Q99956 384 aaKnown RBP16.03■□□□□ 0.16
CSMD1-207ENST00000520451 NT5C1AQ9BXI3 368 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 MMRN2Q9H8L6 949 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 APOBEC3GQ9HC16 384 aaKnown RBP16.03■□□□□ 0.16
CSMD1-207ENST00000520451 POLMQ9NP87 494 aaPredicted RBP16.03■□□□□ 0.16
CSMD1-207ENST00000520451 SPHK2Q9NRA0 654 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 BCCIPQ9P287 314 aaKnown RBP eCLIP16.03■□□□□ 0.16
CSMD1-207ENST00000520451 DEC1Q9P2X7 70 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 ZDHHC9Q9Y397 364 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 MYOFQ9NZM1 2061 aa16.03■□□□□ 0.16
CSMD1-207ENST00000520451 FAM237AA0A1B0GTK4 181 aa16.02■□□□□ 0.16
CSMD1-207ENST00000520451 CYP26A1O43174 497 aa16.02■□□□□ 0.16
CSMD1-207ENST00000520451 ADAM23O75077 832 aa16.02■□□□□ 0.16
CSMD1-207ENST00000520451 TULP3O75386 442 aa16.02■□□□□ 0.16
CSMD1-207ENST00000520451 TBX18O95935 607 aa16.02■□□□□ 0.16
CSMD1-207ENST00000520451 CD58P19256 250 aa16.02■□□□□ 0.16
CSMD1-207ENST00000520451 DHPSP49366 369 aaPredicted RBP16.02■□□□□ 0.16
CSMD1-207ENST00000520451 PPP3CAQ08209 521 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms