RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 SLC24A2Q9UI40 661 aa26.84■■□□□ 1.89
COL13A1-213ENST00000520267 ATP2C2O75185 946 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 CD4P01730 458 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 KRT15P19012 456 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 GNL1P36915 607 aaPredicted RBP26.83■■□□□ 1.89
COL13A1-213ENST00000520267 BBS9Q3SYG4 887 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 EFHC2Q5JST6 749 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 FBXW10Q5XX13 1052 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 NUGGCQ68CJ6 796 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 ATP11CQ8NB49 1132 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 PCDH19Q8TAB3 1148 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 USP6NLQ92738 828 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 ADAM33Q9BZ11 813 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 KDM4CQ9H3R0 1056 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 TRABDQ9H4I3 376 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 USP29Q9HBJ7 922 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 FAM47DPA6NHR8 397 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 OAS1P00973 400 aaKnown RBP26.83■■□□□ 1.89
COL13A1-213ENST00000520267 WDR4P57081 412 aaKnown RBP26.83■■□□□ 1.89
COL13A1-213ENST00000520267 BST2Q10589 180 aaKnown RBP26.83■■□□□ 1.89
COL13A1-213ENST00000520267 PPP1R21Q6ZMI0 780 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 C3orf62Q6ZUJ4 267 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 ZDHHC17Q8IUH5 632 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 CRYBG2Q8N1P7 616 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 ANKRD52Q8NB46 1076 aa26.83■■□□□ 1.89
COL13A1-213ENST00000520267 ACTR5Q9H9F9 607 aaPredicted RBP26.83■■□□□ 1.89
COL13A1-213ENST00000520267 APOL1O14791 398 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 SNX16P57768 344 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 XKR4Q5GH76 650 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 MAGEB18Q96M61 343 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 TGS1Q96RS0 853 aaKnown RBP26.82■■□□□ 1.88
COL13A1-213ENST00000520267 HEY1Q9Y5J3 304 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 SMAPO00193 183 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 PIAS1O75925 651 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 LCP1P13796 627 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 PHBP35232 272 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 ATXN1P54253 815 aaKnown RBP26.82■■□□□ 1.88
COL13A1-213ENST00000520267 GEMIN4P57678 1058 aaKnown RBP26.82■■□□□ 1.88
COL13A1-213ENST00000520267 RNASELQ05823 741 aaKnown RBP26.82■■□□□ 1.88
COL13A1-213ENST00000520267 SYCP2LQ5T4T6 812 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 SLC9A4Q6AI14 798 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 PDIK1LQ8N165 341 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 FBF1Q8TES7 1133 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 TBCBQ99426 244 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 SNX25Q9H3E2 840 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 GDAP2Q9NXN4 497 aa26.82■■□□□ 1.88
COL13A1-213ENST00000520267 PSMC3IPQ9P2W1 217 aaPredicted RBP26.82■■□□□ 1.88
COL13A1-213ENST00000520267 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.81■■□□□ 1.88
COL13A1-213ENST00000520267 A0A1W2PPM1 405 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 H0YHG0 523 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 IGF2BP3O00425 579 aaKnown RBP eCLIP26.81■■□□□ 1.88
COL13A1-213ENST00000520267 MDM4O15151 490 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 MAP3K6O95382 1288 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 KCNE1P15382 129 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 BCAR1P56945 870 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 RASA2Q15283 850 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 C4orf33Q8N1A6 199 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 ARRDC4Q8NCT1 418 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 SGSM3Q96HU1 749 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 ZNF560Q96MR9 790 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 PPCSQ9HAB8 311 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 TGM2P21980 687 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 FOXN2P32314 431 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 BCAT1P54687 386 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 IRF5Q13568 498 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 KCNJ11Q14654 390 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 C11orf84Q9BUA3 381 aaPredicted RBP26.81■■□□□ 1.88
COL13A1-213ENST00000520267 MAGEB5Q9BZ81 275 aa26.81■■□□□ 1.88
COL13A1-213ENST00000520267 KCNN4O15554 427 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 CYP2B6P20813 491 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 TAF6P49848 677 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 CPT1AP50416 773 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 ZKSCAN8Q15776 578 aaPredicted RBP26.8■■□□□ 1.88
COL13A1-213ENST00000520267 PPP6R3Q5H9R7 873 aaPredicted RBP26.8■■□□□ 1.88
COL13A1-213ENST00000520267 SLC26A9Q7LBE3 791 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 IGDCC3Q8IVU1 814 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 PALM2Q8IXS6 379 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 CNPY4Q8N129 248 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 DENND1AQ8TEH3 1009 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 LRRN4Q8WUT4 740 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 IPPQ9Y573 584 aa26.8■■□□□ 1.88
COL13A1-213ENST00000520267 PRPF4O43172 522 aaKnown RBP eCLIP26.79■■□□□ 1.88
COL13A1-213ENST00000520267 GHRP10912 638 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 RBL1P28749 1068 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 PTPN9P43378 593 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 SCTRP47872 440 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 SMG8Q8ND04 991 aaKnown RBP26.79■■□□□ 1.88
COL13A1-213ENST00000520267 APPL2Q8NEU8 664 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 SLC2A14Q8TDB8 520 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 SMC6Q96SB8 1091 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 PAIP2Q9BPZ3 127 aaKnown RBP26.79■■□□□ 1.88
COL13A1-213ENST00000520267 CHMP2BQ9UQN3 213 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 DESP17661 470 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 RPL34P49207 117 aaKnown RBP26.79■■□□□ 1.88
COL13A1-213ENST00000520267 CRYBB1P53674 252 aaPredicted RBP26.79■■□□□ 1.88
COL13A1-213ENST00000520267 SLC20A2Q08357 652 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 CST9Q5W186 159 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 CENPIQ92674 756 aaPredicted RBP26.79■■□□□ 1.88
COL13A1-213ENST00000520267 FAF2Q96CS3 445 aa26.79■■□□□ 1.88
COL13A1-213ENST00000520267 ZNF670Q9BS34 389 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms