RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 IL1R2P27930 398 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 HSPA1LP34931 641 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 THBS3P49746 956 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 ZNF135P52742 658 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 GNAI1P63096 354 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 TEFQ10587 303 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 KIF22Q14807 665 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 RRS1Q15050 365 aaKnown RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 C3orf36Q3SXR2 165 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 RNF219Q5W0B1 726 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 ICE2Q659A1 982 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 SULT6B1Q6IMI4 303 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 FAM9BQ8IZU0 186 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 GALNT4Q8N4A0 578 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 TCP11L2Q8N4U5 519 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 WDR66Q8TBY9 1149 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 NSUN6Q8TEA1 469 aaKnown RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 JADE3Q92613 823 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 LTV1Q96GA3 475 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 MACROD1Q9BQ69 325 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 THAP7Q9BT49 309 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 CHMP4BQ9H444 224 aaKnown RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 MYH16Q9H6N6 1097 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 BABAM1Q9NWV8 329 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 SCAF8Q9UPN6 1271 aaKnown RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 CFAP20Q9Y6A4 193 aaKnown RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 XIRP1Q702N8 1843 aaKnown RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 SOS1Q07889 1333 aaPredicted RBP2.32□□□□□ -2.04
CCNC-208ENST00000519617 PCDH11XQ9BZA7 1347 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 PCDH11YQ9BZA8 1340 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 KIAA0232Q92628 1395 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 OVOS2A0A0G2JMS6 1433 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 CRB1P82279 1406 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 SLIT3O75094 1523 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 NRKQ7Z2Y5 1582 aa2.32□□□□□ -2.04
CCNC-208ENST00000519617 SHPRHQ149N8 1683 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 USP54Q70EL1 1684 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 ALS2Q96Q42 1657 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 FAM208AQ9UK61 1670 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 TRPM3Q9HCF6 1732 aaPredicted RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 COL14A1Q05707 1796 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 CCDC154A6NI56 674 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 KIF20AO95235 890 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 NPSP0C0P6 89 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 CT47B1P0C2W7 299 aaPredicted RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 RARBP10826 455 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 CYP2A6P11509 494 aaPredicted RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 PRF1P14222 555 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 ENGP17813 658 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 CHRM3P20309 590 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 C5AR1P21730 350 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 PRKAR2BP31323 418 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 MASP1P48740 699 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 FXR1P51114 621 aaKnown RBP eCLIP2.31□□□□□ -2.04
CCNC-208ENST00000519617 RIPK4P57078 832 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 RBM6P78332 1123 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 DSC2Q02487 901 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 BOP1Q14137 746 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 EIF4A2Q14240 407 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 RBMS2Q15434 407 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 CLUL1Q15846 466 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 INAVAQ3KP66 663 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 TBC1D25Q3MII6 688 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 LEXMQ3ZCV2 418 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 KHDC1Q4VXA5 237 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 HSP90AB2PQ58FF8 381 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 CT47A1Q5JQC4 288 aaPredicted RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 FCRL6Q6DN72 434 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 SHC4Q6S5L8 630 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 SLC4A10Q6U841 1118 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 MTHFD1LQ6UB35 978 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 TMEM108Q6UXF1 575 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 ZNF813Q6ZN06 617 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 C9orf47Q6ZRZ4 202 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 TTC7BQ86TV6 843 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 WDR63Q8IWG1 891 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 TTC5Q8N0Z6 440 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP2.31□□□□□ -2.04
CCNC-208ENST00000519617 ZCRB1Q8TBF4 217 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 COG1Q8WTW3 980 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 DDX17Q92841 729 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 KAT5Q92993 513 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 COA7Q96BR5 231 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 DAZAP1Q96EP5 407 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 LYZL4Q96KX0 146 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 VRK1Q99986 396 aaPredicted RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 FAM118BQ9BPY3 351 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 TEX13AQ9BXU3 409 aaPredicted RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 ZNF112Q9UJU3 913 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 AFF2P51816 1311 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 IGSF1Q8N6C5 1336 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 CACNA1IQ9P0X4 2223 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 NCAPD2Q15021 1401 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 COL16A1Q07092 1604 aaPredicted RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 PHRF1Q9P1Y6 1649 aaKnown RBP2.31□□□□□ -2.04
CCNC-208ENST00000519617 PIK3C2AO00443 1686 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 NWD2Q9ULI1 1742 aa2.31□□□□□ -2.04
CCNC-208ENST00000519617 MAP2P11137 1827 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms