RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 DHX34Q14147 1143 aaKnown RBP8.36□□□□□ -1.07
CLK4-203ENST00000519583 CYP1B1Q16678 543 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 ATP13A4Q4VNC1 1196 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 HSP90B2PQ58FF3 399 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 CCDC137Q6PK04 289 aaKnown RBP8.36□□□□□ -1.07
CLK4-203ENST00000519583 ACOT1Q86TX2 421 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 XYLT1Q86Y38 959 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 TTC39CQ8N584 583 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 JOSD2Q8TAC2 188 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 C1orf54Q8WWF1 131 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 HEMGNQ9BXL5 484 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 RAB17Q9H0T7 212 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 IRAK3Q9Y616 596 aa8.36□□□□□ -1.07
CLK4-203ENST00000519583 AGPSO00116 658 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 LINC01565O15544 149 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 HCRTO43612 131 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 LILRB3O75022 631 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 CLASP2O75122 1294 aaKnown RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 RALAP11233 206 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 FGFR3P22607 806 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 RFC1P35251 1148 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 COILP38432 576 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 GGCXP38435 758 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 GPD2P43304 727 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 LILRA4P59901 499 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 PSMD5Q16401 504 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 GOLGA7BQ2TAP0 167 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 ZFYVE27Q5T4F4 411 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 ANKS1BQ7Z6G8 1248 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 KATNAL2Q8IYT4 538 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 EIF1ADQ8N9N8 165 aaKnown RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 SEC14L1Q92503 715 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SUSD3Q96L08 255 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 KLHL5Q96PQ7 755 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 CDCA3Q99618 268 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 ERP44Q9BS26 406 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 METTL5Q9NRN9 209 aaKnown RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 FAM49BQ9NUQ9 324 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 PCYOX1Q9UHG3 505 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 TSPAN16Q9UKR8 245 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 TIMM13Q9Y5L4 95 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 PI4K2BG5E9Z4 385 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 PIK3R2O00459 728 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SPTLC1O15269 473 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SYF2O95926 243 aaKnown RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 KRT3P12035 628 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 NDUFV1P49821 464 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 GYS2P54840 703 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SNX1Q13596 522 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SOWAHAQ2M3V2 549 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 DUPD1Q68J44 220 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 CCDC105Q8IYK2 499 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 EMC1Q8N766 993 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 EFHBQ8N7U6 833 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 OR6B3Q8NGW1 331 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 ATG4AQ8WYN0 398 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 PIK3R5Q8WYR1 880 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 HLA-CQ95604 372 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 RNF25Q96BH1 459 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 ACSF2Q96CM8 615 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 PABPC5Q96DU9 382 aaKnown RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 ZNF560Q96MR9 790 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.35□□□□□ -1.07
CLK4-203ENST00000519583 RASAL2Q9UJF2 1139 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SIGLEC16A6NMB1 481 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SYN3O14994 580 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 TEX28O15482 410 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 KRT1P04264 644 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 ADH1AP07327 375 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 PSMA2P25787 234 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 PIGHQ14442 188 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 SV2CQ496J9 727 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 VARS2Q5ST30 1063 aaKnown RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 TXNRD3NBQ6F5E7 133 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 LCLAT1Q6UWP7 414 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 C12orf50Q8NA57 414 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 APPL2Q8NEU8 664 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 FAM71BQ8TC56 605 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SENP8Q96LD8 212 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 LPIN3Q9BQK8 851 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 FAM124BQ9H5Z6 455 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 UBE2ZQ9H832 354 aaPredicted RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 MED4Q9NPJ6 270 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 FAM114A2Q9NRY5 505 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 KIAA1257Q9ULG3 409 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 PCDHB8Q9UN66 801 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 R3HDM2Q9Y2K5 976 aaKnown RBP8.35□□□□□ -1.07
CLK4-203ENST00000519583 SNX24Q9Y343 169 aa8.35□□□□□ -1.07
CLK4-203ENST00000519583 SCN1AP35498 2009 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 SLC34A2O95436 690 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 KCNA5P22460 613 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 FLT3P36888 993 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 PNPLA4P41247 253 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 RGS7P49802 495 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 GABPB1Q06547 395 aaPredicted RBP8.34□□□□□ -1.07
CLK4-203ENST00000519583 ADAM15Q13444 863 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 PPP1R26Q5T8A7 1209 aaPredicted RBP8.34□□□□□ -1.07
CLK4-203ENST00000519583 ANKS3Q6ZW76 656 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 MREGQ8N565 214 aa8.34□□□□□ -1.07
CLK4-203ENST00000519583 EXD1Q8NHP7 514 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms