RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 ACTRT2Q8TDY3 377 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 R3HDM4Q96D70 268 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 EID2BQ96D98 161 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 C18orf8Q96DM3 657 aa5.27□□□□□ -1.57
SQLE-202ENST00000518604 DPCDQ9BVM2 203 aaPredicted RBP5.27□□□□□ -1.57
SQLE-202ENST00000518604 A8MVJ9 347 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 GCOM1H8Y6P7 765 aaPredicted RBP5.26□□□□□ -1.57
SQLE-202ENST00000518604 SYT5O00445 386 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 KIAA0355O15063 1070 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 GCP02774 474 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 ITGA5P08648 1049 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 PECAM1P16284 738 aaPredicted RBP5.26□□□□□ -1.57
SQLE-202ENST00000518604 PDIA3P30101 505 aaKnown RBP5.26□□□□□ -1.57
SQLE-202ENST00000518604 GKP32189 559 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 TRAPPC10P48553 1259 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 PDE1AP54750 535 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 TPTEP56180 551 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 FOXO1Q12778 655 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 TRIM14Q14142 442 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 ELF2Q15723 593 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 GATAD2AQ86YP4 633 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 RASGRP3Q8IV61 690 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 EXOC8Q8IYI6 725 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 NGDNQ8NEJ9 315 aaKnown RBP5.26□□□□□ -1.57
SQLE-202ENST00000518604 SUN3Q8TAQ9 357 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 XAGE5Q8WWM1 108 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 RSC1A1Q92681 617 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 LTV1Q96GA3 475 aaPredicted RBP5.26□□□□□ -1.57
SQLE-202ENST00000518604 WDR24Q96S15 920 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 RMDN3Q96TC7 470 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 AS3MTQ9HBK9 375 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 AGO4Q9HCK5 861 aaKnown RBP5.26□□□□□ -1.57
SQLE-202ENST00000518604 OBP2BQ9NPH6 170 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 RXFP3Q9NSD7 469 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 FOXJ2Q9P0K8 574 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 IGSF9Q9P2J2 1179 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 RIMKLBQ9ULI2 386 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 SLC27A6Q9Y2P4 619 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 HS3ST3A1Q9Y663 406 aa5.26□□□□□ -1.57
SQLE-202ENST00000518604 LGALS16A8MUM7 142 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 AGPSO00116 658 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 EXOC5O00471 708 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 PIP5K1BO14986 540 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 PMPCBO75439 489 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 ERBB2P04626 1255 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 NPPBP16860 134 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 NDUFB7P17568 137 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 SERPINF1P36955 418 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 ACVRL1P37023 503 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 GDF5P43026 501 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 RARRES1P49788 294 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 CLCN2P51788 898 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 SUMO2P61956 95 aaKnown RBP5.25□□□□□ -1.57
SQLE-202ENST00000518604 ZXDAP98168 799 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 DHX8Q14562 1220 aaKnown RBP5.25□□□□□ -1.57
SQLE-202ENST00000518604 ACOX1Q15067 660 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 ERCC6LQ2NKX8 1250 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 TMEM63BQ5T3F8 832 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 DENND2CQ68D51 928 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 GGT6Q6P531 493 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 CLEC9AQ6UXN8 241 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 Q6ZWC4 215 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 GRASPQ7Z6J2 395 aaPredicted RBP5.25□□□□□ -1.57
SQLE-202ENST00000518604 PEG10Q86TG7 708 aaKnown RBP5.25□□□□□ -1.57
SQLE-202ENST00000518604 GGNQ86UU5 652 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 TTC30AQ86WT1 665 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 FSTL5Q8N475 847 aaPredicted RBP5.25□□□□□ -1.57
SQLE-202ENST00000518604 LRRC71Q8N4P6 559 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 SIRT6Q8N6T7 355 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 IPO4Q8TEX9 1081 aaKnown RBP5.25□□□□□ -1.57
SQLE-202ENST00000518604 GRAMD1AQ96CP6 724 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 PRPF18Q99633 342 aaKnown RBP5.25□□□□□ -1.57
SQLE-202ENST00000518604 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
SQLE-202ENST00000518604 LOC102724159A0A0B4J2E5 919 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 CYR61O00622 381 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 ZSCAN9O15535 394 aaPredicted RBP5.24□□□□□ -1.57
SQLE-202ENST00000518604 FAM163BP0C2L3 166 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 SRGAP2BP0DMP2 458 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 MYCLP12524 364 aaPredicted RBP5.24□□□□□ -1.57
SQLE-202ENST00000518604 KRT4P19013 534 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 PCSK6P29122 969 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 NTSR1P30989 418 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 HTR7P34969 479 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 GRK6P43250 576 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 DGKQP52824 942 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 SOX10P56693 466 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 GALNT1Q10472 559 aaPredicted RBP5.24□□□□□ -1.57
SQLE-202ENST00000518604 FHL3Q13643 280 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 PWP2Q15269 919 aaKnown RBP5.24□□□□□ -1.57
SQLE-202ENST00000518604 ARHGAP15Q53QZ3 475 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 AARS2Q5JTZ9 985 aaKnown RBP5.24□□□□□ -1.57
SQLE-202ENST00000518604 CCDC174Q6PII3 467 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 MRGPRGQ86SM5 289 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 NRSN1Q8IZ57 195 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 CACNA2D3Q8IZS8 1091 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 NKAPQ8N5F7 415 aaKnown RBP5.24□□□□□ -1.57
SQLE-202ENST00000518604 SPATA5Q8NB90 893 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 ABHD11Q8NFV4 315 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 CTHRC1Q96CG8 243 aa5.24□□□□□ -1.57
SQLE-202ENST00000518604 VPS50Q96JG6 964 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms