RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 CALCAP01258 141 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 RPN1P04843 607 aaKnown RBP9.17□□□□□ -0.94
PABPC1-202ENST00000517403 NUDT7P0C024 238 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 ADORA2BP29275 332 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 GCLMP48507 274 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 IFNAR2P48551 515 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 TNNC1P63316 161 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 BIRC3Q13489 604 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 CSRP2Q16527 193 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 C2orf27AQ580R0 203 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 LY6G5CQ5SRR4 150 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 C4orf50Q6ZRC1 276 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 CLEC20AQ6ZU45 233 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 TOGARAM2Q6ZUX3 1019 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 NUDT18Q6ZVK8 323 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 SCD5Q86SK9 330 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 RASSF3Q86WH2 238 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 HSCBQ8IWL3 235 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 ADGRG2Q8IZP9 1017 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 CPA6Q8N4T0 437 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 ALLCQ8N6M5 410 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 IL17RCQ8NAC3 791 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 SLC2A14Q8TDB8 520 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 RLN3Q8WXF3 142 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 ACOX2Q99424 681 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 SLC6A17Q9H1V8 727 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 SNX25Q9H3E2 840 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 KIAA1586Q9HCI6 787 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 CSNK1G1Q9HCP0 422 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 EXOC1Q9NV70 894 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 THG1LQ9NWX6 298 aaKnown RBP9.17□□□□□ -0.94
PABPC1-202ENST00000517403 UXTQ9UBK9 157 aaPredicted RBP9.17□□□□□ -0.94
PABPC1-202ENST00000517403 MBD1Q9UIS9 605 aaPredicted RBP9.17□□□□□ -0.94
PABPC1-202ENST00000517403 GMEB2Q9UKD1 530 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 CEP192Q8TEP8 1941 aa9.17□□□□□ -0.94
PABPC1-202ENST00000517403 MYO18AQ92614 2054 aaKnown RBP9.16□□□□□ -0.94
PABPC1-202ENST00000517403 SPEGQ15772 3267 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 C3orf80F5H4A9 247 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 SLC30A4O14863 429 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 GIPC1O14908 333 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 KRT37O76014 449 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 RHOBTB3O94955 611 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 TOP3BO95985 862 aaKnown RBP9.16□□□□□ -0.94
PABPC1-202ENST00000517403 KLKB1P03952 638 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 IRF1P10914 325 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 CMA1P23946 247 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 LMNB2Q03252 620 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 INCA1Q0VD86 236 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 GRSF1Q12849 480 aaKnown RBP eCLIP9.16□□□□□ -0.94
PABPC1-202ENST00000517403 SURF1Q15526 300 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 CEP135Q66GS9 1140 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 ANO7Q6IWH7 933 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 SYT13Q7L8C5 426 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 TMEM25Q86YD3 366 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 OLIG1Q8TAK6 271 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 TMEM174Q8WUU8 243 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 NDRG1Q92597 394 aaKnown RBP9.16□□□□□ -0.94
PABPC1-202ENST00000517403 ATP2A3Q93084 1043 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 FBXO32Q969P5 355 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 FNBP1Q96RU3 617 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 ZSWIM1Q9BR11 485 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 CDV3Q9UKY7 258 aaKnown RBP9.16□□□□□ -0.94
PABPC1-202ENST00000517403 TRAF3IP3Q9Y228 551 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 ZFHX4Q86UP3 3567 aa9.16□□□□□ -0.94
PABPC1-202ENST00000517403 ATXN2Q99700 1313 aaKnown RBP9.15□□□□□ -0.94
PABPC1-202ENST00000517403 TRIM49BA6NDI0 452 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 PRRT4C9JH25 899 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 PDXKO00764 312 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 CILPO75339 1184 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 ABL1P00519 1130 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 MBL2P11226 248 aaPredicted RBP9.15□□□□□ -0.94
PABPC1-202ENST00000517403 DRD1P21728 446 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 MPLP40238 635 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 PIK3CAP42336 1068 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 NRLP54845 237 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 MAP3K7CLP57077 242 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 MCCD1P59942 119 aaPredicted RBP9.15□□□□□ -0.94
PABPC1-202ENST00000517403 AMPD3Q01432 767 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 PSMD2Q13200 908 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 PNOCQ13519 176 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 TUSC1Q2TAM9 212 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 CBWD6Q4V339 395 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 ZNF667Q5HYK9 610 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 PPM1JQ5JR12 505 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 CBWD3Q5JTY5 395 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 CBWD5Q5RIA9 395 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 SNX30Q5VWJ9 437 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 EGFLAMQ63HQ2 1017 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 PMS2CLQ68D20 193 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 KIAA1211LQ6NV74 962 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 KRBA2Q6ZNG9 492 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 STXBP4Q6ZWJ1 553 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 CEP68Q76N32 757 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 NUP93Q8N1F7 819 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 CRYBG2Q8N1P7 616 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 SYNPOQ8N3V7 929 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 NAT16Q8N8M0 369 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 FSIP1Q8NA03 581 aa9.15□□□□□ -0.94
PABPC1-202ENST00000517403 TXNDC5Q8NBS9 432 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms