RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 KRT81Q14533 505 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 PLS1Q14651 629 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 WTAPQ15007 396 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 PDCD1Q15116 288 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 RASA2Q15283 850 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANKRD1Q15327 319 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 SF3B3Q15393 1217 aaKnown RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CDSNQ15517 529 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TAF5Q15542 800 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIP6Q15654 476 aaKnown RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 RAB30Q15771 203 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC6Q16204 474 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 BAK1Q16611 211 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CPEB4Q17RY0 729 aaKnown RBP eCLIP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 PRSS53Q2L4Q9 553 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 MPEG1Q2M385 716 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TRIM71Q2Q1W2 868 aaKnown RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 MUM1Q2TAK8 710 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 C5orf22Q49AR2 442 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 FLYWCH1Q4VC44 716 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 AMOTQ4VCS5 1084 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 C19orf54Q5BKX5 351 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 DNAJC21Q5F1R6 531 aaKnown RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CT83Q5H943 113 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TCP11X2Q5H9J9 407 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TOR2AQ5JU69 321 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ATXN7L2Q5T6C5 722 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ATPAF1Q5TC12 328 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 MAP3K21Q5TCX8 1036 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 MORN5Q5VZ52 161 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARL6IP4Q66PJ3 421 aaKnown RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 NUGGCQ68CJ6 796 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 HAUS3Q68CZ6 603 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 GPR139Q6DWJ6 353 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ACAD10Q6JQN1 1059 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 NAA16Q6N069 864 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC30A6Q6NXT4 461 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 JMJD6Q6NYC1 403 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 MIS18BP1Q6P0N0 1132 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TATDN1Q6P1N9 297 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CEP85Q6P2H3 762 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 PLBD1Q6P4A8 553 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 NFRKBQ6P4R8 1299 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC62Q6P9F0 684 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF449Q6P9G9 518 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 INO80CQ6PI98 192 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 FBXO38Q6PIJ6 1188 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 USP17L6PQ6QN14 398 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 KLHL17Q6TDP4 642 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 KLHL24Q6TFL4 600 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 Q6ZNX1 250 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CATSPERGQ6ZRH7 1159 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMTC3Q6ZXV5 915 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 RAPH1Q70E73 1250 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 HTR3DQ70Z44 454 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 B4GALNT4Q76KP1 1039 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 MIGA2Q7L4E1 593 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ENOSF1Q7L5Y1 443 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 SLC29A4Q7RTT9 530 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CATSPER4Q7RTX7 472 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 GALNTL5Q7Z4T8 443 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 WDR53Q7Z5U6 358 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC91Q7Z6B0 441 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CLNKQ7Z7G1 428 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 PRPF39Q86UA1 669 aaKnown RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 MOGAT3Q86VF5 341 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARHGEF25Q86VW2 580 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 OSTM1Q86WC4 334 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CXorf67Q86X51 503 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 IQCA1Q86XH1 822 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 KRT73Q86Y46 540 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 RAB11FIP4Q86YS3 637 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 GALNT13Q8IUC8 556 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ARMC8Q8IUR7 673 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 EPHX4Q8IUS5 362 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 NOSTRINQ8IVI9 506 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 HERC6Q8IVU3 1022 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC103Q8IW40 242 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC117Q8IWD4 279 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ELOA2Q8IYF1 753 aaPredicted RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC105Q8IYK2 499 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 KIAA2013Q8IYS2 634 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TAGAPQ8N103 731 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ADSSL1Q8N142 457 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 OR8H3Q8N146 312 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 Q8N1X5 172 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TXLNBQ8N3L3 684 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CARNMT1Q8N4J0 409 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMEM57Q8N5G2 664 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CISD2Q8N5K1 135 aaKnown RBP0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 CCDC33Q8N5R6 958 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 NGEFQ8N5V2 710 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 FITM2Q8N6M3 262 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 TMCO5AQ8N6Q1 288 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 PPM1NQ8N819 430 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ZNF366Q8N895 744 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 RNF152Q8N8N0 203 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ATG16L2Q8NAA4 619 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 USP38Q8NB14 1042 aa0.64□□□□□ -2.31
RNU4-54P-201ENST00000516428 ANKRD52Q8NB46 1076 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms