RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 PPP2R3CQ969Q6 453 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 MTFMTQ96DP5 389 aaKnown RBP1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 C17orf80Q9BSJ5 609 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 CDT1Q9H211 546 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 C6orf106Q9H6K1 298 aaPredicted RBP1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 CD93Q9NPY3 652 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 PLSCR4Q9NRQ2 329 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 ARL8BQ9NVJ2 186 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 PNPOQ9NVS9 261 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 PCDHA7Q9UN72 937 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 PCDHA1Q9Y5I3 950 aa1.96□□□□□ -2.1
RNU6-561P-201ENST00000516222 TTBK1Q5TCY1 1321 aaPredicted RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 F8W810 466 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 H3BUI4 141 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 NTN3O00634 580 aaPredicted RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 AHSGP02765 367 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 FTLP02792 175 aaPredicted RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 CSF1RP07333 972 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 APEHP13798 732 aaKnown RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 CD19P15391 556 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 EPHA3P29320 983 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 POLD2P49005 469 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 CXCR3P49682 368 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 HK3P52790 923 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 P2RX3P56373 397 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 YPEL5P62699 121 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 PSG6Q00889 435 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 EXOSC9Q06265 439 aaKnown RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 MFSD13AQ14CX5 517 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 IZUMO4Q1ZYL8 232 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 AWAT1Q58HT5 328 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 KHDC1LQ5JSQ8 128 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 WASHC2DQ5SRD0 308 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 DPY19L3Q6ZPD9 716 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 PNMA8AQ86V59 439 aaPredicted RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 C12orf76Q8N812 135 aaPredicted RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 C1orf162Q8NEQ5 155 aaPredicted RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 ELP5Q8TE02 316 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 WFIKKN2Q8TEU8 576 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 LPAR1Q92633 364 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 SCNM1Q9BWG6 230 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 SEZ6LQ9BYH1 1024 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 TM6SF1Q9BZW5 370 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 CXorf36Q9H7Y0 433 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 SLC5A4Q9NY91 659 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 PLK2Q9NYY3 685 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 DRG1Q9Y295 367 aaKnown RBP1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 SNX14Q9Y5W7 946 aa1.95□□□□□ -2.1
RNU6-561P-201ENST00000516222 TMEM272A0A1B0GTI8 110 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 LRRC14BA6NHZ5 514 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 PHGDHO43175 533 aaKnown RBP1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 VNN1O95497 513 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 MYBL2P10244 700 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 PKMP14618 531 aaKnown RBP1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 TYRP14679 529 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 KCNA3P22001 575 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 CCND1P24385 295 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 DIO1P49895 249 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 SOX8P57073 446 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 SEC23BQ15437 767 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 KRT71Q3SY84 523 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 MORC1Q86VD1 984 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 PPP1R3BQ86XI6 285 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 UEVLDQ8IX04 471 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 CNTD1Q8N815 330 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 FAM71DQ8N9W8 422 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 PIGKQ92643 395 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 MIB2Q96AX9 1013 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 HES6Q96HZ4 224 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 VPS50Q96JG6 964 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 SLITRK1Q96PX8 696 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 NUAK2Q9H093 628 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 TMX1Q9H3N1 280 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 RMI1Q9H9A7 625 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 TRIM36Q9NQ86 728 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 NKX1-2Q9UD57 310 aaPredicted RBP1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 IPO11Q9UI26 975 aaKnown RBP1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 COG5Q9UP83 839 aa1.94□□□□□ -2.1
RNU6-561P-201ENST00000516222 ZNF335Q9H4Z2 1342 aaPredicted RBP1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 RPS10-NUDT3A0A1W2PQS6 291 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 SHTN1A0MZ66 631 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 RGS10O43665 173 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 TLX3O43711 291 aaPredicted RBP1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 EPN2O95208 641 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 MT-CO1P00395 513 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 PLAUP00749 431 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 HOXC6P09630 235 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 PLA2G2AP14555 144 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 HDCP19113 662 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 ARRB2P32121 409 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 BCAT1P54687 386 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 UCP3P55916 312 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 DSCR9P59020 149 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 KRT85P78386 507 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 DDR1Q08345 913 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 SLC14A1Q13336 389 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 LMBRD2Q68DH5 695 aaPredicted RBP1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 SRGAP1Q7Z6B7 1085 aa1.93□□□□□ -2.1
RNU6-561P-201ENST00000516222 ZNF280BQ86YH2 543 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms