RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SLC8A3P57103 927 aa25.83■■□□□ 1.73
SNF8-213ENST00000514929 FBXO43Q4G163 708 aa25.83■■□□□ 1.73
SNF8-213ENST00000514929 ARHGAP17Q68EM7 881 aa25.83■■□□□ 1.73
SNF8-213ENST00000514929 SUMF1Q8NBK3 374 aa25.83■■□□□ 1.73
SNF8-213ENST00000514929 NT5C1BQ96P26 610 aa25.83■■□□□ 1.73
SNF8-213ENST00000514929 C2orf42Q9NWW7 574 aa25.83■■□□□ 1.73
SNF8-213ENST00000514929 K7ESF4 209 aa25.82■■□□□ 1.72
SNF8-213ENST00000514929 IRF1P10914 325 aa25.82■■□□□ 1.72
SNF8-213ENST00000514929 DHCR24Q15392 516 aa25.82■■□□□ 1.72
SNF8-213ENST00000514929 PKN3Q6P5Z2 889 aa25.82■■□□□ 1.72
SNF8-213ENST00000514929 SRRTQ9BXP5 876 aaKnown RBP25.82■■□□□ 1.72
SNF8-213ENST00000514929 CYLDQ9NQC7 956 aa25.82■■□□□ 1.72
SNF8-213ENST00000514929 A0A1W2PQH9 124 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 CHURC1-FNTBB4DL54 471 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 PMM2O15305 246 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 FGFR1OPO95684 399 aaKnown RBP25.81■■□□□ 1.72
SNF8-213ENST00000514929 CD19P15391 556 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 ATP5C1P36542 298 aaKnown RBP25.81■■□□□ 1.72
SNF8-213ENST00000514929 FNTBP49356 437 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 HEATR6Q6AI08 1181 aaKnown RBP25.81■■□□□ 1.72
SNF8-213ENST00000514929 RUBCNQ92622 972 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 EPC1Q9H2F5 836 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 NMUR1Q9HB89 426 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 OSER1Q9NX31 292 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 NAGPAQ9UK23 515 aa25.81■■□□□ 1.72
SNF8-213ENST00000514929 RIF1Q5UIP0 2472 aaKnown RBP25.8■■□□□ 1.72
SNF8-213ENST00000514929 P4HA2O15460 535 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 TBX18O95935 607 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 ADH1CP00326 375 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 RARGP13631 454 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 OPRD1P41143 372 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 PSEN1P49768 467 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 DMWDQ09019 674 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 GOLGA7BQ2TAP0 167 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 SGO2Q562F6 1265 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 CCDC186Q7Z3E2 898 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 TRIM59Q8IWR1 403 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 PPM1KQ8N3J5 372 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 ANKRD52Q8NB46 1076 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 OTUB2Q96DC9 234 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 SMG5Q9UPR3 1016 aaKnown RBP25.8■■□□□ 1.72
SNF8-213ENST00000514929 SLC8A2Q9UPR5 921 aa25.8■■□□□ 1.72
SNF8-213ENST00000514929 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.8■■□□□ 1.72
SNF8-213ENST00000514929 CCDC192P0DO97 292 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 MARSP56192 900 aaKnown RBP25.79■■□□□ 1.72
SNF8-213ENST00000514929 GOLGA8FQ08AF8 430 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 GOLGA8DPQ0D2H9 430 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 KCNH2Q12809 1159 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 GAB4Q2WGN9 574 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 RHBDF2Q6PJF5 856 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 PIGZQ86VD9 579 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 LONP2Q86WA8 852 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 EZH1Q92800 747 aaPredicted RBP25.79■■□□□ 1.72
SNF8-213ENST00000514929 UBXN6Q9BZV1 441 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.79■■□□□ 1.72
SNF8-213ENST00000514929 NCDNQ9UBB6 729 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 HESX1Q9UBX0 185 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 TSPAN16Q9UKR8 245 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 USP3Q9Y6I4 520 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 FAM186AA6NE01 2351 aa25.79■■□□□ 1.72
SNF8-213ENST00000514929 AFPP02771 609 aaKnown RBP25.78■■□□□ 1.72
SNF8-213ENST00000514929 ADH5P11766 374 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 C10orf120Q5SQS8 335 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 TADA2BQ86TJ2 420 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 TTC30AQ86WT1 665 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 BBS7Q8IWZ6 715 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 UBR7Q8N806 425 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 RPLP0P6Q8NHW5 317 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 CCDC26Q8TAB7 109 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 WBP2Q969T9 261 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 KLF16Q9BXK1 252 aaPredicted RBP25.78■■□□□ 1.72
SNF8-213ENST00000514929 RWDD2AQ9UIY3 292 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 DNMT3LQ9UJW3 386 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 LSM7Q9UK45 103 aaKnown RBP25.78■■□□□ 1.72
SNF8-213ENST00000514929 NUDT5Q9UKK9 219 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 RAB23Q9ULC3 237 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 PCDHB4Q9Y5E5 795 aa25.78■■□□□ 1.72
SNF8-213ENST00000514929 PTPRZ1P23471 2315 aaPredicted RBP25.78■■□□□ 1.72
SNF8-213ENST00000514929 RALAP11233 206 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 VDRP11473 427 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 HOXA6P31267 233 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 BCAT1P54687 386 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 LY6G5CQ5SRR4 150 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 KLHDC10Q6PID8 442 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 TMEM270Q6UE05 265 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 SCD5Q86SK9 330 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 LMO3Q8TAP4 145 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 CLIC5Q9NZA1 410 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 KIAA1257Q9ULG3 409 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 CFAP54Q96N23 3096 aa25.77■■□□□ 1.72
SNF8-213ENST00000514929 MDM4O15151 490 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 HOXC13P31276 330 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 EIF2DP41214 584 aaKnown RBP25.76■■□□□ 1.71
SNF8-213ENST00000514929 GAD2Q05329 585 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 PDE4CQ08493 712 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 PRR23BQ6ZRT6 265 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 CREBRFQ8IUR6 639 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 ARHGAP18Q8N392 663 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 DCLK2Q8N568 766 aa25.76■■□□□ 1.71
SNF8-213ENST00000514929 EHBP1Q8NDI1 1231 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms