RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 BAP1Q92560 729 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 PLA2G2FQ9BZM2 168 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 ZNF518BQ9C0D4 1074 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 CSNK1G1Q9HCP0 422 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 IMPACTQ9P2X3 320 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 UXTQ9UBK9 157 aaPredicted RBP21.25■□□□□ 0.99
USP53-208ENST00000514305 PCDHGC3Q9UN70 934 aa21.25■□□□□ 0.99
USP53-208ENST00000514305 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.25■□□□□ 0.99
USP53-208ENST00000514305 PTPRZ1P23471 2315 aaPredicted RBP21.24■□□□□ 0.99
USP53-208ENST00000514305 FAM186AA6NE01 2351 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 FAM170BA6NMN3 283 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 AKR1B15C9JRZ8 316 aaPredicted RBP21.24■□□□□ 0.99
USP53-208ENST00000514305 M0QYV0 167 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 CLDN5O00501 218 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 NCAM2O15394 837 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 AP5Z1O43299 807 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 RTN3O95197 1032 aaPredicted RBP21.24■□□□□ 0.99
USP53-208ENST00000514305 GYPCP04921 128 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 GLULP15104 373 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 CCR2P41597 374 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 ARID5AQ03989 594 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 FAM78AQ5JUQ0 283 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 ZNF852Q6ZMS4 543 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 TRIM72Q6ZMU5 477 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 SLC47A2Q86VL8 602 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 HS6ST3Q8IZP7 471 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 DNASE1L2Q92874 299 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 ASB16Q96NS5 453 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 NELL2Q99435 816 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 TRMT61BQ9BVS5 477 aaKnown RBP21.24■□□□□ 0.99
USP53-208ENST00000514305 MIS12Q9H081 205 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 SLITRK6Q9H5Y7 841 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 BRD9Q9H8M2 597 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 LTB4R2Q9NPC1 389 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 SPATA6Q9NWH7 488 aaPredicted RBP21.24■□□□□ 0.99
USP53-208ENST00000514305 MRPS17Q9Y2R5 130 aaKnown RBP21.24■□□□□ 0.99
USP53-208ENST00000514305 R4GN57 208 aa21.24■□□□□ 0.99
USP53-208ENST00000514305 RIF1Q5UIP0 2472 aaKnown RBP21.23■□□□□ 0.99
USP53-208ENST00000514305 F8VP50 259 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 XPO1O14980 1071 aaKnown RBP21.23■□□□□ 0.99
USP53-208ENST00000514305 LAMTOR5O43504 91 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 LMNAP02545 664 aaKnown RBP21.23■□□□□ 0.99
USP53-208ENST00000514305 SP9P0CG40 484 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 CD72P21854 359 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 FCARP24071 287 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 MAP3K7CLP57077 242 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 KLHL30Q0D2K2 578 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 GRM2Q14416 872 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 DENND5BQ6ZUT9 1274 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 PAQR9Q6ZVX9 377 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 NUP93Q8N1F7 819 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 TMEM35BQ8NCS4 154 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 SMARCD2Q92925 531 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 LPIN3Q9BQK8 851 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 LHX5Q9H2C1 402 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 FBXO44Q9H4M3 255 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 HEBP1Q9NRV9 189 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 TICRRQ7Z2Z1 1910 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 CACNA1IQ9P0X4 2223 aa21.23■□□□□ 0.99
USP53-208ENST00000514305 VNN2O95498 520 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 PNMA6AP0CW24 399 aaPredicted RBP21.22■□□□□ 0.99
USP53-208ENST00000514305 ACADSBP45954 432 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 EPHA5P54756 1037 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 CDR2Q01850 454 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 DDR2Q16832 855 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 EPS8L1Q8TE68 723 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 TFAP2BQ92481 460 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 IRF7Q92985 503 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 PSMG2Q969U7 264 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 HSFY1Q96LI6 401 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 GCNAQ96QF7 691 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 LRRC4Q9HBW1 653 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 CYLDQ9NQC7 956 aa21.22■□□□□ 0.99
USP53-208ENST00000514305 MTF2Q9Y483 593 aaPredicted RBP21.22■□□□□ 0.99
USP53-208ENST00000514305 LSM8O95777 96 aaKnown RBP21.21■□□□□ 0.99
USP53-208ENST00000514305 SERPING1P05155 500 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 GJA1P17302 382 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 PSMC3P17980 439 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 TNFAIP3P21580 790 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 PRKCIP41743 596 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 PPP3CCP48454 512 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 TEAD2Q15562 447 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 TDRD12Q587J7 1177 aaKnown RBP21.21■□□□□ 0.99
USP53-208ENST00000514305 CLEC20AQ6ZU45 233 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 ZSCAN18Q8TBC5 510 aaPredicted RBP21.21■□□□□ 0.99
USP53-208ENST00000514305 STK32AQ8WU08 396 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 DEPDC1BQ8WUY9 529 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 CRISPLD1Q9H336 500 aa21.21■□□□□ 0.99
USP53-208ENST00000514305 MAN2B1O00754 1011 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 PLA2G4AP47712 749 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 TBX2Q13207 712 aaPredicted RBP21.2■□□□□ 0.98
USP53-208ENST00000514305 CCDC142Q17RM4 750 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 IRF2BP2Q7Z5L9 587 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 DNAJB7Q7Z6W7 309 aaPredicted RBP21.2■□□□□ 0.98
USP53-208ENST00000514305 TTC9BQ8N6N2 239 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 UBA3Q8TBC4 463 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 GIPC2Q8TF65 315 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 E2F7Q96AV8 911 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 ZSWIM3Q96MP5 696 aa21.2■□□□□ 0.98
USP53-208ENST00000514305 SLITRK1Q96PX8 696 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms