RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 MYO1EQ12965 1108 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 CAMK2BQ13554 666 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 CCDC142Q17RM4 750 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 SOWAHAQ2M3V2 549 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 EGFLAMQ63HQ2 1017 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 KIAA1324Q6UXG2 1013 aaKnown RBP12.84□□□□□ -0.35
PTPN20-229ENST00000513756 DBX2Q6ZNG2 339 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 ZCCHC9Q8N567 271 aaKnown RBP12.84□□□□□ -0.35
PTPN20-229ENST00000513756 FAM184AQ8NB25 1140 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 CADM4Q8NFZ8 388 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 MRGPRX1Q96LB2 322 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 C8orf48Q96LL4 319 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
PTPN20-229ENST00000513756 GABRG3Q99928 467 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 DUSP9Q99956 384 aaKnown RBP12.84□□□□□ -0.35
PTPN20-229ENST00000513756 MIR1-1HGQ9H1L0 117 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 IL21RQ9HBE5 538 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 SPHK2Q9NRA0 654 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 NAV2Q8IVL1 2488 aa12.84□□□□□ -0.35
PTPN20-229ENST00000513756 TISP43B9A030 160 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 GFRA2O00451 464 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 BCAT2O15382 392 aaPredicted RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 TNFSF14O43557 240 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 ATP2C2O75185 946 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 NCAM1P13591 858 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 OXTRP30559 389 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 NEK4P51957 841 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 PSMC1P62191 440 aaKnown RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 SMAD1Q15797 465 aaKnown RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 HLA-BQ31612 363 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 METTL3Q86U44 580 aaKnown RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 MARCH9Q86YJ5 346 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 MIB1Q86YT6 1006 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 PDZD8Q8NEN9 1154 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 CALML4Q96GE6 196 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 TOE1Q96GM8 510 aaKnown RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 FAM213AQ9BRX8 229 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 ST6GALNAC4Q9H4F1 302 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 PRORYQ9H606 182 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 CD248Q9HCU0 757 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 DNAJC17Q9NVM6 304 aaKnown RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 HCN2Q9UL51 889 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
PTPN20-229ENST00000513756 ZNF462Q96JM2 2506 aa12.83□□□□□ -0.36
PTPN20-229ENST00000513756 VWA3AA6NCI4 1184 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 F8VP50 259 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 RRP8O43159 456 aaKnown RBP12.82□□□□□ -0.36
PTPN20-229ENST00000513756 HCRTO43612 131 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 LDHAP00338 332 aaKnown RBP12.82□□□□□ -0.36
PTPN20-229ENST00000513756 ST3GAL1Q11201 340 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 TMEM25Q86YD3 366 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 BRSK2Q8IWQ3 736 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 MYCBPAPQ8TBZ2 947 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 OVCA2Q8WZ82 227 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 HVCN1Q96D96 273 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 NXPE2Q96DL1 559 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 ERLEC1Q96DZ1 483 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 FIZ1Q96SL8 496 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 ACOX2Q99424 681 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 GPR174Q9BXC1 333 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 CRTAC1Q9NQ79 661 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 WSB2Q9NYS7 404 aaPredicted RBP12.82□□□□□ -0.36
PTPN20-229ENST00000513756 EXOC7Q9UPT5 735 aa12.82□□□□□ -0.36
PTPN20-229ENST00000513756 FAM149AA5PLN7 773 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 J3QKU1 62 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 COCHO43405 550 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 RTN3O95197 1032 aaPredicted RBP12.81□□□□□ -0.36
PTPN20-229ENST00000513756 PDGFRBP09619 1106 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 TMEM191BP0C7N4 346 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 LMO2P25791 158 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 YWHAQP27348 245 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 ADSSP30520 456 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 STARD3Q14849 445 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 HECTD3Q5T447 861 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 DCAF12L1Q5VU92 463 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
PTPN20-229ENST00000513756 TMPRSS12Q86WS5 348 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 BBS7Q8IWZ6 715 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 ZNF843Q8N446 348 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 CXorf38Q8TB03 319 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 FBXO32Q969P5 355 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 PCED1BQ96HM7 432 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 AK8Q96MA6 479 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 SLC6A17Q9H1V8 727 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 ITM2CQ9NQX7 267 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 RBAKQ9NYW8 714 aaPredicted RBP12.81□□□□□ -0.36
PTPN20-229ENST00000513756 USP36Q9P275 1121 aaKnown RBP12.81□□□□□ -0.36
PTPN20-229ENST00000513756 WDR35Q9P2L0 1181 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 LIMCH1Q9UPQ0 1083 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 RAD54BQ9Y620 910 aa12.81□□□□□ -0.36
PTPN20-229ENST00000513756 METTL12A8MUP2 240 aa12.8□□□□□ -0.36
PTPN20-229ENST00000513756 TRIM24O15164 1050 aa12.8□□□□□ -0.36
PTPN20-229ENST00000513756 CACNG3O60359 315 aa12.8□□□□□ -0.36
PTPN20-229ENST00000513756 WARSP23381 471 aaKnown RBP12.8□□□□□ -0.36
PTPN20-229ENST00000513756 ITPKBP27987 946 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms