RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 SIPA1Q96FS4 1042 aa12.69□□□□□ -0.38
SFXN1-210ENST00000513725 MRPL4Q9BYD3 311 aaKnown RBP12.69□□□□□ -0.38
SFXN1-210ENST00000513725 ACE2Q9BYF1 805 aaPredicted RBP12.69□□□□□ -0.38
SFXN1-210ENST00000513725 SH3GLB2Q9NR46 395 aa12.69□□□□□ -0.38
SFXN1-210ENST00000513725 PCDHA4Q9UN74 947 aa12.69□□□□□ -0.38
SFXN1-210ENST00000513725 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.69□□□□□ -0.38
SFXN1-210ENST00000513725 NF1P21359 2839 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 HOXC11O43248 304 aaPredicted RBP12.68□□□□□ -0.38
SFXN1-210ENST00000513725 BAG4O95429 457 aaKnown RBP12.68□□□□□ -0.38
SFXN1-210ENST00000513725 HARSP12081 509 aaKnown RBP12.68□□□□□ -0.38
SFXN1-210ENST00000513725 GCFC2P16383 781 aaKnown RBP12.68□□□□□ -0.38
SFXN1-210ENST00000513725 GRIK1P39086 918 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 SLC7A9P82251 487 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 CLN3Q13286 438 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 SAFBQ15424 915 aaKnown RBP eCLIP12.68□□□□□ -0.38
SFXN1-210ENST00000513725 NFE2Q16621 373 aaPredicted RBP12.68□□□□□ -0.38
SFXN1-210ENST00000513725 SKIDA1Q1XH10 827 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 GRAMD4Q6IC98 578 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 ZNF564Q8TBZ8 553 aaPredicted RBP12.68□□□□□ -0.38
SFXN1-210ENST00000513725 OTUB2Q96DC9 234 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 MKRN2Q9H000 416 aaKnown RBP12.68□□□□□ -0.38
SFXN1-210ENST00000513725 PLEKHA5Q9HAU0 1116 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 WDR70Q9NW82 654 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 CPQQ9Y646 472 aa12.68□□□□□ -0.38
SFXN1-210ENST00000513725 OTOGQ6ZRI0 2925 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 A0A087WWV3 80 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 TRAK2O60296 914 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 CD27P26842 260 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 CASRP41180 1078 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 ZNF132P52740 706 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 SPAG1Q07617 926 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 NOLC1Q14978 699 aaKnown RBP eCLIP12.67□□□□□ -0.38
SFXN1-210ENST00000513725 ANO4Q32M45 955 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 PRAMEF14Q5SWL7 426 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 MPZL3Q6UWV2 235 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 DDX42Q86XP3 938 aaKnown RBP eCLIP12.67□□□□□ -0.38
SFXN1-210ENST00000513725 PTRH1Q86Y79 214 aaKnown RBP12.67□□□□□ -0.38
SFXN1-210ENST00000513725 TMPRSS6Q8IU80 811 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 SLC4A5Q9BY07 1137 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 C6orf106Q9H6K1 298 aaPredicted RBP12.67□□□□□ -0.38
SFXN1-210ENST00000513725 GEMIN8Q9NWZ8 242 aaKnown RBP12.67□□□□□ -0.38
SFXN1-210ENST00000513725 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
SFXN1-210ENST00000513725 CRYBG3Q68DQ2 2970 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 WASH3PC4AMC7 463 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 TRIM24O15164 1050 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 VILLO15195 856 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 CCNT1O60563 726 aaKnown RBP12.66□□□□□ -0.38
SFXN1-210ENST00000513725 ARRB1P49407 418 aaPredicted RBP12.66□□□□□ -0.38
SFXN1-210ENST00000513725 TSPY1Q01534 308 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 ZBTB6Q15916 424 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 KANSL1Q7Z3B3 1105 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 FAM124AQ86V42 546 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 BLIDQ8IZY5 108 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 SLC46A1Q96NT5 459 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 TARS2Q9BW92 718 aaKnown RBP12.66□□□□□ -0.38
SFXN1-210ENST00000513725 DNAJC17Q9NVM6 304 aaKnown RBP12.66□□□□□ -0.38
SFXN1-210ENST00000513725 TRPM5Q9NZQ8 1165 aa12.66□□□□□ -0.38
SFXN1-210ENST00000513725 ATXN7L1Q9ULK2 861 aaPredicted RBP12.66□□□□□ -0.38
SFXN1-210ENST00000513725 F8P00451 2351 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 M0R2N6 131 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 PPEF2O14830 753 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 SLC27A2O14975 620 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 SGSM2O43147 1006 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 EFSO43281 561 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 SYNCRIPO60506 623 aaKnown RBP12.65□□□□□ -0.38
SFXN1-210ENST00000513725 CSO75390 466 aaKnown RBP12.65□□□□□ -0.38
SFXN1-210ENST00000513725 AGFG2O95081 481 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 CYP11B2P19099 503 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 PROZP22891 400 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 EPHA8P29322 1005 aaPredicted RBP12.65□□□□□ -0.38
SFXN1-210ENST00000513725 SHBQ15464 509 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 CDCP2Q5VXM1 449 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 ZNF787Q6DD87 383 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 B4GALNT3Q6L9W6 998 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 NEK8Q86SG6 692 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 ATCAYQ86WG3 371 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 SRRM1Q8IYB3 904 aaKnown RBP12.65□□□□□ -0.38
SFXN1-210ENST00000513725 BIRC7Q96CA5 298 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 NAP1L4Q99733 375 aaKnown RBP12.65□□□□□ -0.38
SFXN1-210ENST00000513725 RNF26Q9BY78 433 aaPredicted RBP12.65□□□□□ -0.38
SFXN1-210ENST00000513725 ABCB6Q9NP58 842 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 TMLHEQ9NVH6 421 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 STON1Q9Y6Q2 735 aa12.65□□□□□ -0.38
SFXN1-210ENST00000513725 SPENQ96T58 3664 aaKnown RBP12.64□□□□□ -0.39
SFXN1-210ENST00000513725 TP53BP1Q12888 1972 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-210ENST00000513725 VPS37CA5D8V6 355 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-210ENST00000513725 PRRT4C9JH25 899 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 CYB561D2O14569 222 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 FSBPO95073 299 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 CXCL8P10145 99 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 CYP2F1P24903 491 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 CHMLP26374 656 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 GUCY2FP51841 1108 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 BCAT1P54687 386 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
SFXN1-210ENST00000513725 HDAC1Q13547 482 aaPredicted RBP12.64□□□□□ -0.39
SFXN1-210ENST00000513725 SEZ6Q53EL9 994 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 C3orf38Q5JPI3 329 aa12.64□□□□□ -0.39
SFXN1-210ENST00000513725 CHD1LQ86WJ1 897 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms