RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 DNAJC17Q9NVM6 304 aaKnown RBP11.19□□□□□ -0.62
CLDND1-227ENST00000513452 GDAP2Q9NXN4 497 aa11.19□□□□□ -0.62
CLDND1-227ENST00000513452 EHD2Q9NZN4 543 aa11.19□□□□□ -0.62
CLDND1-227ENST00000513452 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.19□□□□□ -0.62
CLDND1-227ENST00000513452 HECTD1Q9ULT8 2610 aa11.19□□□□□ -0.62
CLDND1-227ENST00000513452 MUC22E2RYF6 1773 aaPredicted RBP11.18□□□□□ -0.62
CLDND1-227ENST00000513452 MYOFQ9NZM1 2061 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 E2F8A0AVK6 867 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 F8VP50 259 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 PLK4O00444 970 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 GABRDO14764 452 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 TRIM66O15016 1216 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 BCAT2O15382 392 aaPredicted RBP11.18□□□□□ -0.62
CLDND1-227ENST00000513452 KRT18P05783 430 aaKnown RBP11.18□□□□□ -0.62
CLDND1-227ENST00000513452 PPP3CCP48454 512 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 ZNF131P52739 623 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 GTF2BQ00403 316 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 TAF10Q12962 218 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 SMAD1Q15797 465 aaKnown RBP11.18□□□□□ -0.62
CLDND1-227ENST00000513452 SOWAHAQ2M3V2 549 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 IL27RAQ6UWB1 636 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 DHRS13Q6UX07 377 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 TMEM25Q86YD3 366 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 CSGALNACT2Q8N6G5 542 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 TOP6BLQ8N6T0 577 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 FBXO18Q8NFZ0 1043 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 DNASE2BQ8WZ79 361 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 OTUB2Q96DC9 234 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 ZFRQ96KR1 1074 aaKnown RBP11.18□□□□□ -0.62
CLDND1-227ENST00000513452 SLITRK1Q96PX8 696 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 FIZ1Q96SL8 496 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 GABRG3Q99928 467 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 GPR174Q9BXC1 333 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 CRTAC1Q9NQ79 661 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 SPHK2Q9NRA0 654 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 ITGA11Q9UKX5 1188 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 STARD13Q9Y3M8 1113 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 STYXL1Q9Y6J8 313 aa11.18□□□□□ -0.62
CLDND1-227ENST00000513452 SHROOM3Q8TF72 1996 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 GOLGA4Q13439 2230 aaKnown RBP11.17□□□□□ -0.62
CLDND1-227ENST00000513452 MYO18AQ92614 2054 aaKnown RBP11.17□□□□□ -0.62
CLDND1-227ENST00000513452 MYO18BQ8IUG5 2567 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 CAPN9O14815 690 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 COCHO43405 550 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 TBCAO75347 108 aaKnown RBP11.17□□□□□ -0.62
CLDND1-227ENST00000513452 IRF1P10914 325 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 LMO2P25791 158 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 ABCD1P33897 745 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 NOP14P78316 857 aaKnown RBP11.17□□□□□ -0.62
CLDND1-227ENST00000513452 POU5F1Q01860 360 aaKnown RBP11.17□□□□□ -0.62
CLDND1-227ENST00000513452 MAPRE1Q15691 268 aaKnown RBP11.17□□□□□ -0.62
CLDND1-227ENST00000513452 DCAF12L1Q5VU92 463 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 TDRD10Q5VZ19 366 aaKnown RBP11.17□□□□□ -0.62
CLDND1-227ENST00000513452 LRRC69Q6ZNQ3 347 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 CCDC83Q8IWF9 413 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 KCTD17Q8N5Z5 321 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 LSM14AQ8ND56 463 aaKnown RBP11.17□□□□□ -0.62
CLDND1-227ENST00000513452 CXorf38Q8TB03 319 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 SCFD1Q8WVM8 642 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 KBTBD7Q8WVZ9 684 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 NXPE2Q96DL1 559 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 PCED1BQ96HM7 432 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 CEP295NLQ96MC4 621 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 FAM213AQ9BRX8 229 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 MTMR12Q9C0I1 747 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 CDH9Q9ULB4 789 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 SH3BP1Q9Y3L3 701 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 NFE2L3Q9Y4A8 694 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 PCDHGB2Q9Y5G2 931 aa11.17□□□□□ -0.62
CLDND1-227ENST00000513452 A0A1B0GVT2 93 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 VWA3AA6NCI4 1184 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 WASH3PC4AMC7 463 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 PRRT4C9JH25 899 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 E9PAM4 449 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 NEDD8-MDP1E9PL57 170 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 TNFSF14O43557 240 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 TLX3O43711 291 aaPredicted RBP11.16□□□□□ -0.62
CLDND1-227ENST00000513452 PDGFRBP09619 1106 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 ADSSP30520 456 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 EIF2S3P41091 472 aaKnown RBP11.16□□□□□ -0.62
CLDND1-227ENST00000513452 CACNA2D1P54289 1103 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 ANAPC15P60006 121 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 RBP5P82980 135 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 SEMG2Q02383 582 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 CFHR1Q03591 330 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 MYO1EQ12965 1108 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 SUZ12Q15022 739 aaKnown RBP11.16□□□□□ -0.62
CLDND1-227ENST00000513452 PTPRNQ16849 979 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 MDH1BQ5I0G3 518 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 DBX2Q6ZNG2 339 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 BRSK2Q8IWQ3 736 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 ZSWIM2Q8NEG5 633 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 CADM4Q8NFZ8 388 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 CACTINQ8WUQ7 758 aaKnown RBP11.16□□□□□ -0.62
CLDND1-227ENST00000513452 SNX19Q92543 992 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 WBP2Q969T9 261 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 SAAL1Q96ER3 474 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 C8orf48Q96LL4 319 aa11.16□□□□□ -0.62
CLDND1-227ENST00000513452 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
CLDND1-227ENST00000513452 WSB2Q9NYS7 404 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms