RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 KCND2Q9NZV8 630 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 MAGEC2Q9UBF1 373 aaPredicted RBP11.94□□□□□ -0.5
RNF4-218ENST00000513284 AGO2Q9UKV8 859 aaKnown RBP11.94□□□□□ -0.5
RNF4-218ENST00000513284 LIMCH1Q9UPQ0 1083 aa11.94□□□□□ -0.5
RNF4-218ENST00000513284 COL12A1Q99715 3063 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 METTL12A8MUP2 240 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 KCNK3O14649 394 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 TRAK2O60296 914 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 ABL1P00519 1130 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 CD6P30203 668 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 GRIK1P39086 918 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 PRPHP41219 470 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 PNPLA4P41247 253 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 MATKP42679 507 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 LHX1P48742 406 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 PSMC1P62191 440 aaKnown RBP11.93□□□□□ -0.5
RNF4-218ENST00000513284 NOP14P78316 857 aaKnown RBP11.93□□□□□ -0.5
RNF4-218ENST00000513284 TMEM119Q4V9L6 283 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 DHRS13Q6UX07 377 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 VSTM1Q6UX27 236 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 DTHD1Q6ZMT9 781 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 METTL3Q86U44 580 aaKnown RBP11.93□□□□□ -0.5
RNF4-218ENST00000513284 MYCT1Q8N699 235 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 MYLPFQ96A32 169 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 P2RY11Q96G91 374 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 ZSCAN31Q96LW9 406 aaPredicted RBP11.93□□□□□ -0.5
RNF4-218ENST00000513284 ZNF560Q96MR9 790 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 GPR174Q9BXC1 333 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 MIR1-1HGQ9H1L0 117 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 SPHK2Q9NRA0 654 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 GMIPQ9P107 970 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 TBC1D14Q9P2M4 693 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 SIX4Q9UIU6 781 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 KIF3AQ9Y496 699 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 NFE2L3Q9Y4A8 694 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 SNX9Q9Y5X1 595 aa11.93□□□□□ -0.5
RNF4-218ENST00000513284 MUC22E2RYF6 1773 aaPredicted RBP11.92□□□□□ -0.5
RNF4-218ENST00000513284 A0A1B0GVT2 93 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 E9PAM4 449 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 F8VP50 259 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 PYCARD-AS1I3L0S3 204 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 K7ENM7 598 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 BCAT2O15382 392 aaPredicted RBP11.92□□□□□ -0.5
RNF4-218ENST00000513284 FLRT2O43155 660 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 COCHO43405 550 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 TNFSF14O43557 240 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 GREM1O60565 184 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 PDGFRBP09619 1106 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 CISD3P0C7P0 127 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 MBL2P11226 248 aaPredicted RBP11.92□□□□□ -0.5
RNF4-218ENST00000513284 NCAM1P13591 858 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 PPP3CCP48454 512 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 TFAMQ00059 246 aaKnown RBP11.92□□□□□ -0.5
RNF4-218ENST00000513284 CFHR1Q03591 330 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 DCAF12L1Q5VU92 463 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 NT5DC4Q86YG4 428 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 CCDC83Q8IWF9 413 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 CHPFQ8IZ52 775 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 ADGRF2Q8IZF7 708 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 CSGALNACT2Q8N6G5 542 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 TOP6BLQ8N6T0 577 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 LRRC52Q8N7C0 313 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 CADM4Q8NFZ8 388 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 PCED1BQ96HM7 432 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 CEP295NLQ96MC4 621 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 FCRL3Q96P31 734 aaPredicted RBP11.92□□□□□ -0.5
RNF4-218ENST00000513284 SYT15Q9BQS2 421 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 MKRN2Q9H000 416 aaKnown RBP11.92□□□□□ -0.5
RNF4-218ENST00000513284 USP36Q9P275 1121 aaKnown RBP11.92□□□□□ -0.5
RNF4-218ENST00000513284 CHORDC1Q9UHD1 332 aaPredicted RBP11.92□□□□□ -0.5
RNF4-218ENST00000513284 ODF2LQ9ULJ1 636 aa11.92□□□□□ -0.5
RNF4-218ENST00000513284 IL18RAPO95256 599 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 CER1O95813 267 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 CENPBP07199 599 aaPredicted RBP11.91□□□□□ -0.5
RNF4-218ENST00000513284 HLA-EP13747 358 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 PCSK1P29120 753 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 CSNK1EP49674 416 aaKnown RBP11.91□□□□□ -0.5
RNF4-218ENST00000513284 PGFP49763 221 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 KIF19Q2TAC6 998 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 ANO4Q32M45 955 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 CCDC157Q569K6 752 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 KCNT1Q5JUK3 1230 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 BTBD8Q5XKL5 378 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 SLFN12LQ6IEE8 588 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 KIAA1324Q6UXG2 1013 aaKnown RBP11.91□□□□□ -0.5
RNF4-218ENST00000513284 C4orf50Q6ZRC1 276 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 TMPRSS12Q86WS5 348 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 KCTD17Q8N5Z5 321 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 OTUB2Q96DC9 234 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 C8orf48Q96LL4 319 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 KIF2CQ99661 725 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 DUSP9Q99956 384 aaKnown RBP11.91□□□□□ -0.5
RNF4-218ENST00000513284 PARVGQ9HBI0 331 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.91□□□□□ -0.5
RNF4-218ENST00000513284 BLOC1S4Q9NUP1 217 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 EIF2B4Q9UI10 523 aaKnown RBP11.91□□□□□ -0.5
RNF4-218ENST00000513284 CDH9Q9ULB4 789 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 SNX11Q9Y5W9 270 aa11.91□□□□□ -0.5
RNF4-218ENST00000513284 LAD1O00515 517 aa11.9□□□□□ -0.5
RNF4-218ENST00000513284 SCP2P22307 547 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms