RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 DNAJB7Q7Z6W7 309 aaPredicted RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 REXO1L1PQ8IX06 675 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 RHOT2Q8IXI1 618 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 CCAR2Q8N163 923 aaKnown RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 EFHBQ8N7U6 833 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 SLC35G2Q8TBE7 412 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 RFFLQ8WZ73 363 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 NDRG1Q92597 394 aaKnown RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 CASP10Q92851 521 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 SELENOOQ9BVL4 669 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 TSGA10Q9BZW7 698 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 IGFLR1Q9H665 355 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 UVRAGQ9P2Y5 699 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 CHORDC1Q9UHD1 332 aaPredicted RBP13.15□□□□□ -0.3
PDPN-210ENST00000513143 TMEM59LQ9UK28 342 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 DUSP10Q9Y6W6 482 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
PDPN-210ENST00000513143 OBSL1O75147 1896 aa13.15□□□□□ -0.31
PDPN-210ENST00000513143 YJEFN3A6XGL0 299 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 E7ENQ6 273 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 CCL16O15467 120 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 CCP110O43303 1012 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 KRT86O43790 486 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 MTA2O94776 668 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 GLP2RO95838 553 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 KRT3P12035 628 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 ARHGAP25P42331 645 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 HADHBP55084 474 aaKnown RBP13.14□□□□□ -0.31
PDPN-210ENST00000513143 TAF10Q12962 218 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 TAF5Q15542 800 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 MON1AQ86VX9 555 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 ELMOD1Q8N336 334 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 FEZF2Q8TBJ5 459 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 OVCA2Q8WZ82 227 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 FBXO32Q969P5 355 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 ZNF512Q96ME7 567 aaPredicted RBP13.14□□□□□ -0.31
PDPN-210ENST00000513143 FAM161BQ96MY7 647 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 SLITRK1Q96PX8 696 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 GAS2L1Q99501 681 aaPredicted RBP13.14□□□□□ -0.31
PDPN-210ENST00000513143 NUP85Q9BW27 656 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 PRKD2Q9BZL6 878 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 METTL5Q9NRN9 209 aaKnown RBP13.14□□□□□ -0.31
PDPN-210ENST00000513143 DZANK1Q9NVP4 752 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 CTTNBP2NLQ9P2B4 639 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 UXTQ9UBK9 157 aaPredicted RBP13.14□□□□□ -0.31
PDPN-210ENST00000513143 TRIM10Q9UDY6 481 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 SALL4Q9UJQ4 1053 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 MAGED2Q9UNF1 606 aaPredicted RBP13.14□□□□□ -0.31
PDPN-210ENST00000513143 COG5Q9UP83 839 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 REV3LO60673 3130 aa13.14□□□□□ -0.31
PDPN-210ENST00000513143 CCDC195A0A1B0GUA6 201 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 TMEM191CA6NGB0 347 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 USP27XA6NNY8 438 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 HSF2BPO75031 334 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 GJB6O95452 261 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 ABL1P00519 1130 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 LTFP02788 710 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 ZDHHC11BP0C7U3 371 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 IGFBP4P22692 258 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 RFC1P35251 1148 aaPredicted RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 YWHAGP61981 247 aaKnown RBP eCLIP13.13□□□□□ -0.31
PDPN-210ENST00000513143 RPL7AP62424 266 aaKnown RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 YWHAZP63104 245 aaKnown RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 ADAM15Q13444 863 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 TAF12Q16514 161 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 HFE2Q6ZVN8 426 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 BEND5Q7L4P6 421 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 SCD5Q86SK9 330 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 TMC8Q8IU68 726 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 ARHGAP18Q8N392 663 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 PDZD8Q8NEN9 1154 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 CMASQ8NFW8 434 aaPredicted RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 ZNF564Q8TBZ8 553 aaPredicted RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 CALR3Q96L12 384 aaKnown RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 LRRC3Q9BY71 257 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 SFXN1Q9H9B4 322 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 IL21Q9HBE4 155 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 LZTFL1Q9NQ48 299 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 TLR8Q9NR97 1041 aaKnown RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
PDPN-210ENST00000513143 GMIPQ9P107 970 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 C2orf16Q68DN1 1984 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 A0A1W2PQH9 124 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 GOLGA6L9A6NEM1 432 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 C2CD4BA6NLJ0 364 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 LINC01565O15544 149 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 NCK2O43639 380 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 XYLBO75191 536 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 DAB1O75553 588 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 GRAP2O75791 330 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 F11P03951 625 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 FYNP06241 537 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 SRGAP2BP0DMP2 458 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 PTPN2P17706 415 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 PPP3CCP48454 512 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 PGFP49763 221 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 PSEN1P49768 467 aa13.13□□□□□ -0.31
PDPN-210ENST00000513143 EPHA5P54756 1037 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms